Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ALG1L5P-201ENST00000482043 771 ntBASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBV5-4A0A0C4DH59 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 MTHFR-217ENST00000641820 1569 ntBASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC093724.1-201ENST00000448659 1027 ntBASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV5-4A0A0C4DH59 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 AL671277.1-201ENST00000429656 993 ntBASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 HTR5BP-201ENST00000430851 1154 ntBASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 DNAJB3-201ENST00000446806 729 ntBASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 CYP2T1P-202ENST00000641596 2535 ntBASIC16.34■□□□□ 0.21
TRBV5-4A0A0C4DH59 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms