Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC36.89■■■■□ 3.5
CDC42BPBQ9Y5S2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC36.89■■■■□ 3.5
CDC42BPBQ9Y5S2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 AL117332.1-201ENST00000622628 974 ntBASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 AC092028.1-203ENST00000608262 953 ntBASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC36.88■■■■□ 3.49
CDC42BPBQ9Y5S2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPBQ9Y5S2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC36.86■■■■□ 3.49
CDC42BPBQ9Y5S2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC36.86■■■■□ 3.49
CDC42BPBQ9Y5S2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPBQ9Y5S2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPBQ9Y5S2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPBQ9Y5S2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPBQ9Y5S2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC36.85■■■■□ 3.49
CDC42BPBQ9Y5S2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC36.85■■■■□ 3.49
CDC42BPBQ9Y5S2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC36.84■■■■□ 3.49
CDC42BPBQ9Y5S2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC36.84■■■■□ 3.49
CDC42BPBQ9Y5S2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC36.84■■■■□ 3.49
CDC42BPBQ9Y5S2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC36.83■■■■□ 3.49
CDC42BPBQ9Y5S2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDC42BPBQ9Y5S2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC36.83■■■■□ 3.49
CDC42BPBQ9Y5S2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC36.83■■■■□ 3.49
CDC42BPBQ9Y5S2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC36.83■■■■□ 3.49
CDC42BPBQ9Y5S2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC36.82■■■■□ 3.49
CDC42BPBQ9Y5S2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC36.82■■■■□ 3.49
CDC42BPBQ9Y5S2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
CDC42BPBQ9Y5S2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
CDC42BPBQ9Y5S2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC36.82■■■■□ 3.48
CDC42BPBQ9Y5S2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC36.81■■■■□ 3.48
CDC42BPBQ9Y5S2 SRR-208ENST00000576848 588 ntTSL 4 BASIC36.81■■■■□ 3.48
CDC42BPBQ9Y5S2 AC110285.6-201ENST00000617652 491 ntBASIC36.81■■■■□ 3.48
CDC42BPBQ9Y5S2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CDC42BPBQ9Y5S2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC36.8■■■■□ 3.48
CDC42BPBQ9Y5S2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CDC42BPBQ9Y5S2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC36.79■■■■□ 3.48
CDC42BPBQ9Y5S2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
CDC42BPBQ9Y5S2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC36.79■■■■□ 3.48
CDC42BPBQ9Y5S2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC36.78■■■■□ 3.48
CDC42BPBQ9Y5S2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CDC42BPBQ9Y5S2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC36.77■■■■□ 3.48
CDC42BPBQ9Y5S2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC36.77■■■■□ 3.48
CDC42BPBQ9Y5S2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC36.76■■■■□ 3.48
CDC42BPBQ9Y5S2 AL512631.2-201ENST00000604634 923 ntBASIC36.76■■■■□ 3.48
CDC42BPBQ9Y5S2 AC011551.1-201ENST00000614101 683 ntBASIC36.76■■■■□ 3.48
CDC42BPBQ9Y5S2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC36.76■■■■□ 3.47
CDC42BPBQ9Y5S2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC36.75■■■■□ 3.47
CDC42BPBQ9Y5S2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
CDC42BPBQ9Y5S2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 AL139246.5-201ENST00000606645 996 ntBASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
CDC42BPBQ9Y5S2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPBQ9Y5S2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPBQ9Y5S2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPBQ9Y5S2 MIR4466-201ENST00000606121 54 ntBASIC36.73■■■■□ 3.47
CDC42BPBQ9Y5S2 RALB-208ENST00000631312 311 ntTSL 5 BASIC36.73■■■■□ 3.47
CDC42BPBQ9Y5S2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC36.72■■■■□ 3.47
CDC42BPBQ9Y5S2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC36.72■■■■□ 3.47
CDC42BPBQ9Y5S2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 AL136116.3-201ENST00000402907 1138 ntBASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 MIR6724-1-201ENST00000616420 92 ntBASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 MIR6724-2-201ENST00000616483 92 ntBASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 MIR6724-4-201ENST00000617390 92 ntBASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 MIR6724-3-201ENST00000622482 92 ntBASIC36.71■■■■□ 3.47
CDC42BPBQ9Y5S2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC36.7■■■■□ 3.47
CDC42BPBQ9Y5S2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC36.7■■■■□ 3.47
CDC42BPBQ9Y5S2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
CDC42BPBQ9Y5S2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC36.7■■■■□ 3.46
CDC42BPBQ9Y5S2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC36.69■■■■□ 3.46
CDC42BPBQ9Y5S2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 MIR3621-201ENST00000580529 85 ntBASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC36.68■■■■□ 3.46
CDC42BPBQ9Y5S2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
CDC42BPBQ9Y5S2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC36.67■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms