Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA2Q9Y5H9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 YBX1P4-201ENST00000392794 808 ntBASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 AC087393.1-201ENST00000582896 145 ntBASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 AL035685.1-201ENST00000636663 812 ntBASIC26.9■■□□□ 1.9
PCDHA2Q9Y5H9 ERN1-208ENST00000606895 2068 ntBASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 MIR4508-201ENST00000584178 70 ntBASIC26.89■■□□□ 1.9
PCDHA2Q9Y5H9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA2Q9Y5H9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA2Q9Y5H9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.88■■□□□ 1.89
PCDHA2Q9Y5H9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 AC019171.1-201ENST00000601251 1056 ntBASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
PCDHA2Q9Y5H9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA2Q9Y5H9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA2Q9Y5H9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 RPS2P7-201ENST00000447334 885 ntBASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA2Q9Y5H9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA2Q9Y5H9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA2Q9Y5H9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA2Q9Y5H9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA2Q9Y5H9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA2Q9Y5H9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
PCDHA2Q9Y5H9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA2Q9Y5H9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.82■■□□□ 1.88
PCDHA2Q9Y5H9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA2Q9Y5H9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHA2Q9Y5H9 AC010501.1-201ENST00000606270 1962 ntBASIC26.82■■□□□ 1.88
PCDHA2Q9Y5H9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA2Q9Y5H9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA2Q9Y5H9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA2Q9Y5H9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.8■■□□□ 1.88
PCDHA2Q9Y5H9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 LONRF2P2-201ENST00000439212 571 ntBASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
PCDHA2Q9Y5H9 KRT18P10-201ENST00000388836 1287 ntBASIC26.78■■□□□ 1.88
PCDHA2Q9Y5H9 AC009299.2-201ENST00000482477 511 ntBASIC26.78■■□□□ 1.88
PCDHA2Q9Y5H9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA2Q9Y5H9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA2Q9Y5H9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA2Q9Y5H9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
PCDHA2Q9Y5H9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA2Q9Y5H9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.88
PCDHA2Q9Y5H9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 AC103724.3-201ENST00000564481 992 ntBASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA2Q9Y5H9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 AC096887.2-201ENST00000623443 1957 ntBASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.75■■□□□ 1.87
PCDHA2Q9Y5H9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms