Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA9Q9Y5G4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHGA9Q9Y5G4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA9Q9Y5G4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA9Q9Y5G4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGA9Q9Y5G4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA9Q9Y5G4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 KRT125P-201ENST00000546827 989 ntBASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA9Q9Y5G4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHGA9Q9Y5G4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA9Q9Y5G4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA9Q9Y5G4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA9Q9Y5G4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA9Q9Y5G4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHGA9Q9Y5G4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA9Q9Y5G4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 BX664725.1-201ENST00000438252 379 ntBASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA9Q9Y5G4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PCDHGA9Q9Y5G4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA9Q9Y5G4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA9Q9Y5G4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA9Q9Y5G4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA9Q9Y5G4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 AC008406.3-201ENST00000620001 1374 ntBASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 KRT18P24-201ENST00000344739 1156 ntBASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 MIR4787-201ENST00000607364 84 ntBASIC22.27■■□□□ 1.16
PCDHGA9Q9Y5G4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
PCDHGA9Q9Y5G4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHGA9Q9Y5G4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA9Q9Y5G4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA9Q9Y5G4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA9Q9Y5G4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA9Q9Y5G4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA9Q9Y5G4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA9Q9Y5G4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms