Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPH3AQ9Y2J0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RPH3AQ9Y2J0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPH3AQ9Y2J0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.75■■□□□ 1.07
RPH3AQ9Y2J0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 DUSP8P4-201ENST00000399538 1761 ntBASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPH3AQ9Y2J0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPH3AQ9Y2J0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 AC010980.1-201ENST00000587192 1142 ntBASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPH3AQ9Y2J0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 RPS2P7-201ENST00000447334 885 ntBASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RPH3AQ9Y2J0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPH3AQ9Y2J0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPH3AQ9Y2J0 AC087393.1-201ENST00000582896 145 ntBASIC21.68■■□□□ 1.06
RPH3AQ9Y2J0 AC019069.1-201ENST00000610008 1333 ntBASIC21.68■■□□□ 1.06
RPH3AQ9Y2J0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.68■■□□□ 1.06
RPH3AQ9Y2J0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.68■■□□□ 1.06
RPH3AQ9Y2J0 AC010501.1-201ENST00000606270 1962 ntBASIC21.68■■□□□ 1.06
RPH3AQ9Y2J0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 AC096887.2-201ENST00000623443 1957 ntBASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 KRT18P10-201ENST00000388836 1287 ntBASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPH3AQ9Y2J0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RPH3AQ9Y2J0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms