Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RNF7Q9UBF6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF7Q9UBF6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RNF7Q9UBF6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF7Q9UBF6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 RPS2P7-201ENST00000447334 885 ntBASIC20.13■□□□□ 0.81
RNF7Q9UBF6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
RNF7Q9UBF6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF7Q9UBF6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF7Q9UBF6 AL033527.3-201ENST00000566366 1196 ntBASIC20.12■□□□□ 0.81
RNF7Q9UBF6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF7Q9UBF6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF7Q9UBF6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 AC139795.1-202ENST00000500444 432 ntBASIC20.11■□□□□ 0.81
RNF7Q9UBF6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 AC097639.1-201ENST00000565519 1891 ntBASIC20.11■□□□□ 0.81
RNF7Q9UBF6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF7Q9UBF6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF7Q9UBF6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF7Q9UBF6 AC087393.1-201ENST00000582896 145 ntBASIC20.1■□□□□ 0.81
RNF7Q9UBF6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF7Q9UBF6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.1■□□□□ 0.81
RNF7Q9UBF6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF7Q9UBF6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
RNF7Q9UBF6 BHLHE23-202ENST00000612929 1109 ntBASIC20.09■□□□□ 0.81
RNF7Q9UBF6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF7Q9UBF6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF7Q9UBF6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF7Q9UBF6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF7Q9UBF6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF7Q9UBF6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 AC074183.2-201ENST00000623112 922 ntBASIC20.05■□□□□ 0.8
RNF7Q9UBF6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF7Q9UBF6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF7Q9UBF6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF7Q9UBF6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF7Q9UBF6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF7Q9UBF6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF7Q9UBF6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF7Q9UBF6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF7Q9UBF6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF7Q9UBF6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RNF7Q9UBF6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms