Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 AC096887.2-201ENST00000623443 1957 ntBASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 AC139795.1-202ENST00000500444 432 ntBASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP4R1LQ9P1A2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP4R1LQ9P1A2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 RPS2P7-201ENST00000447334 885 ntBASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 BHLHE23-202ENST00000612929 1109 ntBASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PPP4R1LQ9P1A2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PPP4R1LQ9P1A2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PPP4R1LQ9P1A2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 AC135731.1-201ENST00000569415 2548 ntBASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
PPP4R1LQ9P1A2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 AC087393.1-201ENST00000582896 145 ntBASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PPP4R1LQ9P1A2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PPP4R1LQ9P1A2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PPP4R1LQ9P1A2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R1LQ9P1A2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R1LQ9P1A2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R1LQ9P1A2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PPP4R1LQ9P1A2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PPP4R1LQ9P1A2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PPP4R1LQ9P1A2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 AC097639.1-201ENST00000565519 1891 ntBASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PPP4R1LQ9P1A2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PPP4R1LQ9P1A2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R1LQ9P1A2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.74■■□□□ 1.07
PPP4R1LQ9P1A2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R1LQ9P1A2 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
PPP4R1LQ9P1A2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PPP4R1LQ9P1A2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PPP4R1LQ9P1A2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms