Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.14■■□□□ 1.62
HCFC1R1Q9NWW0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HCFC1R1Q9NWW0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.14■■□□□ 1.62
HCFC1R1Q9NWW0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
HCFC1R1Q9NWW0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
HCFC1R1Q9NWW0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
HCFC1R1Q9NWW0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
HCFC1R1Q9NWW0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HCFC1R1Q9NWW0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
HCFC1R1Q9NWW0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HCFC1R1Q9NWW0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
HCFC1R1Q9NWW0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HCFC1R1Q9NWW0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
HCFC1R1Q9NWW0 AC137630.3-201ENST00000607245 391 ntBASIC25.08■■□□□ 1.61
HCFC1R1Q9NWW0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 AC008406.3-201ENST00000620001 1374 ntBASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 KRT16P3-201ENST00000439127 1283 ntBASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 TSPY9P-201ENST00000440215 945 ntBASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 TSPY11P-201ENST00000442607 1045 ntBASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HCFC1R1Q9NWW0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.06■■□□□ 1.6
HCFC1R1Q9NWW0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HCFC1R1Q9NWW0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HCFC1R1Q9NWW0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HCFC1R1Q9NWW0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.06■■□□□ 1.6
HCFC1R1Q9NWW0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HCFC1R1Q9NWW0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HCFC1R1Q9NWW0 AC142086.6-201ENST00000621154 1765 ntBASIC25.05■■□□□ 1.6
HCFC1R1Q9NWW0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HCFC1R1Q9NWW0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.04■■□□□ 1.6
HCFC1R1Q9NWW0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HCFC1R1Q9NWW0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HCFC1R1Q9NWW0 AC021242.3-201ENST00000607598 1377 ntBASIC25.04■■□□□ 1.6
HCFC1R1Q9NWW0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HCFC1R1Q9NWW0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.03■■□□□ 1.6
HCFC1R1Q9NWW0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.03■■□□□ 1.6
HCFC1R1Q9NWW0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HCFC1R1Q9NWW0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HCFC1R1Q9NWW0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC1R1Q9NWW0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC1R1Q9NWW0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.01■■□□□ 1.59
HCFC1R1Q9NWW0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC1R1Q9NWW0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HCFC1R1Q9NWW0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 MIR4281-201ENST00000580852 62 ntBASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
HCFC1R1Q9NWW0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.99■■□□□ 1.59
HCFC1R1Q9NWW0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
HCFC1R1Q9NWW0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms