Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 AC100797.4-201ENST00000631653 1827 ntBASIC20.21■□□□□ 0.83
GSX1Q9H4S2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 AC026271.2-201ENST00000428091 497 ntBASIC20.21■□□□□ 0.83
GSX1Q9H4S2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
GSX1Q9H4S2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GSX1Q9H4S2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
GSX1Q9H4S2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.19■□□□□ 0.82
GSX1Q9H4S2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.19■□□□□ 0.82
GSX1Q9H4S2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GSX1Q9H4S2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GSX1Q9H4S2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GSX1Q9H4S2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSX1Q9H4S2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSX1Q9H4S2 AL359504.2-201ENST00000605506 1601 ntBASIC20.17■□□□□ 0.82
GSX1Q9H4S2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GSX1Q9H4S2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GSX1Q9H4S2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.17■□□□□ 0.82
GSX1Q9H4S2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GSX1Q9H4S2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 AC133561.4-201ENST00000566112 224 ntBASIC20.15■□□□□ 0.82
GSX1Q9H4S2 AL117332.1-201ENST00000622628 974 ntBASIC20.15■□□□□ 0.82
GSX1Q9H4S2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
GSX1Q9H4S2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
GSX1Q9H4S2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.14■□□□□ 0.81
GSX1Q9H4S2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSX1Q9H4S2 AC021242.3-201ENST00000607598 1377 ntBASIC20.14■□□□□ 0.81
GSX1Q9H4S2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GSX1Q9H4S2 AC137630.3-201ENST00000607245 391 ntBASIC20.14■□□□□ 0.81
GSX1Q9H4S2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GSX1Q9H4S2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 AC092028.1-203ENST00000608262 953 ntBASIC20.13■□□□□ 0.81
GSX1Q9H4S2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GSX1Q9H4S2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
GSX1Q9H4S2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GSX1Q9H4S2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.12■□□□□ 0.81
GSX1Q9H4S2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GSX1Q9H4S2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.12■□□□□ 0.81
GSX1Q9H4S2 MIR4466-201ENST00000606121 54 ntBASIC20.12■□□□□ 0.81
GSX1Q9H4S2 MIR5787-201ENST00000611784 55 ntBASIC20.12■□□□□ 0.81
GSX1Q9H4S2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 KRT18P24-201ENST00000344739 1156 ntBASIC20.11■□□□□ 0.81
GSX1Q9H4S2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GSX1Q9H4S2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 AC135279.3-201ENST00000610945 1311 ntBASIC20.1■□□□□ 0.81
GSX1Q9H4S2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 MIR3621-201ENST00000580529 85 ntBASIC20.1■□□□□ 0.81
GSX1Q9H4S2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GSX1Q9H4S2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms