Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
HIPK3Q9H422 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HIPK3Q9H422 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HIPK3Q9H422 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HIPK3Q9H422 MIR4281-201ENST00000580852 62 ntBASIC26.44■■□□□ 1.82
HIPK3Q9H422 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HIPK3Q9H422 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HIPK3Q9H422 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
HIPK3Q9H422 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.43■■□□□ 1.82
HIPK3Q9H422 AL117332.1-201ENST00000622628 974 ntBASIC26.43■■□□□ 1.82
HIPK3Q9H422 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
HIPK3Q9H422 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HIPK3Q9H422 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
HIPK3Q9H422 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HIPK3Q9H422 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 AC010997.5-201ENST00000609182 354 ntBASIC26.42■■□□□ 1.82
HIPK3Q9H422 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HIPK3Q9H422 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
HIPK3Q9H422 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HIPK3Q9H422 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HIPK3Q9H422 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.41■■□□□ 1.82
HIPK3Q9H422 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HIPK3Q9H422 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HIPK3Q9H422 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
HIPK3Q9H422 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
HIPK3Q9H422 BX255925.1-201ENST00000566954 1854 ntBASIC26.4■■□□□ 1.82
HIPK3Q9H422 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
HIPK3Q9H422 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
HIPK3Q9H422 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HIPK3Q9H422 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
HIPK3Q9H422 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HIPK3Q9H422 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HIPK3Q9H422 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HIPK3Q9H422 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
HIPK3Q9H422 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HIPK3Q9H422 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
HIPK3Q9H422 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HIPK3Q9H422 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HIPK3Q9H422 MIR3621-201ENST00000580529 85 ntBASIC26.38■■□□□ 1.81
HIPK3Q9H422 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
HIPK3Q9H422 AC110285.6-201ENST00000617652 491 ntBASIC26.38■■□□□ 1.81
HIPK3Q9H422 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
HIPK3Q9H422 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
HIPK3Q9H422 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.37■■□□□ 1.81
HIPK3Q9H422 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.37■■□□□ 1.81
HIPK3Q9H422 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HIPK3Q9H422 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HIPK3Q9H422 MIR6724-1-201ENST00000616420 92 ntBASIC26.37■■□□□ 1.81
HIPK3Q9H422 MIR6724-2-201ENST00000616483 92 ntBASIC26.37■■□□□ 1.81
HIPK3Q9H422 MIR6724-4-201ENST00000617390 92 ntBASIC26.37■■□□□ 1.81
HIPK3Q9H422 MIR6724-3-201ENST00000622482 92 ntBASIC26.37■■□□□ 1.81
HIPK3Q9H422 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.37■■□□□ 1.81
HIPK3Q9H422 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HIPK3Q9H422 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.37■■□□□ 1.81
HIPK3Q9H422 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HIPK3Q9H422 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.36■■□□□ 1.81
HIPK3Q9H422 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HIPK3Q9H422 MTDHP2-201ENST00000601468 714 ntBASIC26.36■■□□□ 1.81
HIPK3Q9H422 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HIPK3Q9H422 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
HIPK3Q9H422 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HIPK3Q9H422 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
HIPK3Q9H422 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.34■■□□□ 1.81
HIPK3Q9H422 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
HIPK3Q9H422 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
HIPK3Q9H422 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.34■■□□□ 1.81
HIPK3Q9H422 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.34■■□□□ 1.81
HIPK3Q9H422 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HIPK3Q9H422 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HIPK3Q9H422 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
HIPK3Q9H422 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.33■■□□□ 1.81
HIPK3Q9H422 AL356740.2-201ENST00000601559 647 ntBASIC26.33■■□□□ 1.81
HIPK3Q9H422 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.33■■□□□ 1.81
HIPK3Q9H422 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HIPK3Q9H422 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.8
HIPK3Q9H422 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.32■■□□□ 1.8
HIPK3Q9H422 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
HIPK3Q9H422 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.32■■□□□ 1.8
HIPK3Q9H422 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HIPK3Q9H422 AC096631.2-201ENST00000436136 790 ntBASIC26.32■■□□□ 1.8
HIPK3Q9H422 AC005837.3-201ENST00000612163 286 ntBASIC26.32■■□□□ 1.8
HIPK3Q9H422 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HIPK3Q9H422 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.31■■□□□ 1.8
HIPK3Q9H422 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.31■■□□□ 1.8
HIPK3Q9H422 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
HIPK3Q9H422 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HIPK3Q9H422 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HIPK3Q9H422 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HIPK3Q9H422 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
HIPK3Q9H422 DRD5P2-201ENST00000421395 2012 ntBASIC26.3■■□□□ 1.8
HIPK3Q9H422 LINC01003-201ENST00000564834 1764 ntBASIC26.3■■□□□ 1.8
HIPK3Q9H422 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
HIPK3Q9H422 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
HIPK3Q9H422 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.3■■□□□ 1.8
HIPK3Q9H422 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms