Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF38Q9H0F5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.93■■□□□ 1.58
RNF38Q9H0F5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF38Q9H0F5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF38Q9H0F5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF38Q9H0F5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
RNF38Q9H0F5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF38Q9H0F5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RNF38Q9H0F5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF38Q9H0F5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
RNF38Q9H0F5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.89■■□□□ 1.58
RNF38Q9H0F5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
RNF38Q9H0F5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF38Q9H0F5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF38Q9H0F5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RNF38Q9H0F5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF38Q9H0F5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.89■■□□□ 1.57
RNF38Q9H0F5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.88■■□□□ 1.57
RNF38Q9H0F5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
RNF38Q9H0F5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 AC022616.5-201ENST00000518796 181 ntBASIC24.87■■□□□ 1.57
RNF38Q9H0F5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 AL121749.1-202ENST00000609313 2153 ntBASIC24.87■■□□□ 1.57
RNF38Q9H0F5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF38Q9H0F5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.86■■□□□ 1.57
RNF38Q9H0F5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF38Q9H0F5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF38Q9H0F5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF38Q9H0F5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF38Q9H0F5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF38Q9H0F5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.83■■□□□ 1.57
RNF38Q9H0F5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.83■■□□□ 1.57
RNF38Q9H0F5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RNF38Q9H0F5 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
RNF38Q9H0F5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF38Q9H0F5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF38Q9H0F5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF38Q9H0F5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF38Q9H0F5 ERN1-208ENST00000606895 2068 ntBASIC24.82■■□□□ 1.56
RNF38Q9H0F5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.81■■□□□ 1.56
RNF38Q9H0F5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.81■■□□□ 1.56
RNF38Q9H0F5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.81■■□□□ 1.56
RNF38Q9H0F5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF38Q9H0F5 KRT18P24-201ENST00000344739 1156 ntBASIC24.8■■□□□ 1.56
RNF38Q9H0F5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
RNF38Q9H0F5 GUSBP5-201ENST00000418136 578 ntBASIC24.8■■□□□ 1.56
RNF38Q9H0F5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF38Q9H0F5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RNF38Q9H0F5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 AC239859.2-201ENST00000444165 318 ntBASIC24.79■■□□□ 1.56
RNF38Q9H0F5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF38Q9H0F5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF38Q9H0F5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF38Q9H0F5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF38Q9H0F5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF38Q9H0F5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF38Q9H0F5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms