Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 AC009831.1-201ENST00000580420 1582 ntBASIC20.38■□□□□ 0.85
RTL8AQ9BWD3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTL8AQ9BWD3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 KRT18P10-201ENST00000388836 1287 ntBASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RTL8AQ9BWD3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTL8AQ9BWD3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RTL8AQ9BWD3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.34■□□□□ 0.85
RTL8AQ9BWD3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTL8AQ9BWD3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTL8AQ9BWD3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.33■□□□□ 0.84
RTL8AQ9BWD3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
RTL8AQ9BWD3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTL8AQ9BWD3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL8AQ9BWD3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.3■□□□□ 0.84
RTL8AQ9BWD3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL8AQ9BWD3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL8AQ9BWD3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL8AQ9BWD3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL8AQ9BWD3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL8AQ9BWD3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL8AQ9BWD3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RTL8AQ9BWD3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 AL592293.1-201ENST00000502889 1188 ntBASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL8AQ9BWD3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RTL8AQ9BWD3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTL8AQ9BWD3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RTL8AQ9BWD3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 AC018755.3-202ENST00000596210 929 ntBASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL8AQ9BWD3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL8AQ9BWD3 AC142381.3-201ENST00000568208 1670 ntBASIC20.25■□□□□ 0.83
RTL8AQ9BWD3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL8AQ9BWD3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL8AQ9BWD3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms