Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL13Q99616 AL033527.3-201ENST00000566366 1196 ntBASIC19.99■□□□□ 0.79
CCL13Q99616 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL13Q99616 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL13Q99616 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL13Q99616 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 TSPY13P-201ENST00000338964 914 ntBASIC19.98■□□□□ 0.79
CCL13Q99616 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCL13Q99616 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL13Q99616 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL13Q99616 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 KRT18P10-201ENST00000388836 1287 ntBASIC19.96■□□□□ 0.79
CCL13Q99616 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
CCL13Q99616 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.96■□□□□ 0.79
CCL13Q99616 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL13Q99616 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCL13Q99616 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL13Q99616 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.95■□□□□ 0.78
CCL13Q99616 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL13Q99616 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCL13Q99616 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL13Q99616 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCL13Q99616 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL13Q99616 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCL13Q99616 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCL13Q99616 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.94■□□□□ 0.78
CCL13Q99616 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCL13Q99616 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.94■□□□□ 0.78
CCL13Q99616 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCL13Q99616 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCL13Q99616 RPS2P7-201ENST00000447334 885 ntBASIC19.93■□□□□ 0.78
CCL13Q99616 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.93■□□□□ 0.78
CCL13Q99616 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.93■□□□□ 0.78
CCL13Q99616 BHLHE23-202ENST00000612929 1109 ntBASIC19.93■□□□□ 0.78
CCL13Q99616 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCL13Q99616 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.93■□□□□ 0.78
CCL13Q99616 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL13Q99616 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCL13Q99616 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL13Q99616 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.92■□□□□ 0.78
CCL13Q99616 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCL13Q99616 AC139795.1-202ENST00000500444 432 ntBASIC19.92■□□□□ 0.78
CCL13Q99616 AC097639.1-201ENST00000565519 1891 ntBASIC19.92■□□□□ 0.78
CCL13Q99616 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
CCL13Q99616 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.91■□□□□ 0.78
CCL13Q99616 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCL13Q99616 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.91■□□□□ 0.78
CCL13Q99616 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.91■□□□□ 0.78
CCL13Q99616 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL13Q99616 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCL13Q99616 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.91■□□□□ 0.78
CCL13Q99616 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL13Q99616 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL13Q99616 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCL13Q99616 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.9■□□□□ 0.78
CCL13Q99616 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL13Q99616 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCL13Q99616 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CCL13Q99616 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCL13Q99616 AC087393.1-201ENST00000582896 145 ntBASIC19.89■□□□□ 0.77
CCL13Q99616 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCL13Q99616 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CCL13Q99616 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
CCL13Q99616 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCL13Q99616 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.88■□□□□ 0.77
CCL13Q99616 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.88■□□□□ 0.77
CCL13Q99616 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCL13Q99616 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.87■□□□□ 0.77
CCL13Q99616 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL13Q99616 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCL13Q99616 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms