Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCNX1Q96RV3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PCNX1Q96RV3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.27■■□□□ 1
PCNX1Q96RV3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCNX1Q96RV3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 MIR3621-201ENST00000580529 85 ntBASIC21.26■□□□□ 0.99
PCNX1Q96RV3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.26■□□□□ 0.99
PCNX1Q96RV3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCNX1Q96RV3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCNX1Q96RV3 AC120024.1-201ENST00000562672 995 ntBASIC21.24■□□□□ 0.99
PCNX1Q96RV3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 AC021242.3-201ENST00000607598 1377 ntBASIC21.23■□□□□ 0.99
PCNX1Q96RV3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCNX1Q96RV3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.22■□□□□ 0.99
PCNX1Q96RV3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 MIR4466-201ENST00000606121 54 ntBASIC21.21■□□□□ 0.99
PCNX1Q96RV3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.21■□□□□ 0.99
PCNX1Q96RV3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX1Q96RV3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX1Q96RV3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.2■□□□□ 0.98
PCNX1Q96RV3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.19■□□□□ 0.98
PCNX1Q96RV3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCNX1Q96RV3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.19■□□□□ 0.98
PCNX1Q96RV3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX1Q96RV3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 TSPY9P-201ENST00000440215 945 ntBASIC21.18■□□□□ 0.98
PCNX1Q96RV3 TSPY11P-201ENST00000442607 1045 ntBASIC21.18■□□□□ 0.98
PCNX1Q96RV3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX1Q96RV3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.17■□□□□ 0.98
PCNX1Q96RV3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCNX1Q96RV3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCNX1Q96RV3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCNX1Q96RV3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCNX1Q96RV3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCNX1Q96RV3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.15■□□□□ 0.98
PCNX1Q96RV3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCNX1Q96RV3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.14■□□□□ 0.97
PCNX1Q96RV3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCNX1Q96RV3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.14■□□□□ 0.97
PCNX1Q96RV3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.14■□□□□ 0.97
PCNX1Q96RV3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms