Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CASD1Q96PB1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CASD1Q96PB1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASD1Q96PB1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.88■■□□□ 1.73
CASD1Q96PB1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.88■■□□□ 1.73
CASD1Q96PB1 AC137630.3-201ENST00000607245 391 ntBASIC25.88■■□□□ 1.73
CASD1Q96PB1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASD1Q96PB1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASD1Q96PB1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.88■■□□□ 1.73
CASD1Q96PB1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASD1Q96PB1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.87■■□□□ 1.73
CASD1Q96PB1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CASD1Q96PB1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.87■■□□□ 1.73
CASD1Q96PB1 UNC93B8-201ENST00000511903 705 ntBASIC25.87■■□□□ 1.73
CASD1Q96PB1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASD1Q96PB1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CASD1Q96PB1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASD1Q96PB1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.86■■□□□ 1.73
CASD1Q96PB1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASD1Q96PB1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASD1Q96PB1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASD1Q96PB1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASD1Q96PB1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.86■■□□□ 1.73
CASD1Q96PB1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.85■■□□□ 1.73
CASD1Q96PB1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.85■■□□□ 1.73
CASD1Q96PB1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.85■■□□□ 1.73
CASD1Q96PB1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASD1Q96PB1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CASD1Q96PB1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CASD1Q96PB1 AC142086.6-201ENST00000621154 1765 ntBASIC25.84■■□□□ 1.73
CASD1Q96PB1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASD1Q96PB1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.84■■□□□ 1.73
CASD1Q96PB1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASD1Q96PB1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.84■■□□□ 1.73
CASD1Q96PB1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASD1Q96PB1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CASD1Q96PB1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASD1Q96PB1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.83■■□□□ 1.73
CASD1Q96PB1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.83■■□□□ 1.73
CASD1Q96PB1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CASD1Q96PB1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
CASD1Q96PB1 AC021242.3-201ENST00000607598 1377 ntBASIC25.82■■□□□ 1.72
CASD1Q96PB1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CASD1Q96PB1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CASD1Q96PB1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.82■■□□□ 1.72
CASD1Q96PB1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CASD1Q96PB1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.82■■□□□ 1.72
CASD1Q96PB1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.82■■□□□ 1.72
CASD1Q96PB1 AC019069.1-201ENST00000610008 1333 ntBASIC25.82■■□□□ 1.72
CASD1Q96PB1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CASD1Q96PB1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CASD1Q96PB1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CASD1Q96PB1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.81■■□□□ 1.72
CASD1Q96PB1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASD1Q96PB1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
CASD1Q96PB1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CASD1Q96PB1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CASD1Q96PB1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
CASD1Q96PB1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASD1Q96PB1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CASD1Q96PB1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.77■■□□□ 1.72
CASD1Q96PB1 KRT16P3-201ENST00000439127 1283 ntBASIC25.77■■□□□ 1.72
CASD1Q96PB1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.77■■□□□ 1.72
CASD1Q96PB1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CASD1Q96PB1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CASD1Q96PB1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.76■■□□□ 1.71
CASD1Q96PB1 AC008406.3-201ENST00000620001 1374 ntBASIC25.76■■□□□ 1.71
CASD1Q96PB1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CASD1Q96PB1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CASD1Q96PB1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CASD1Q96PB1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASD1Q96PB1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASD1Q96PB1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.75■■□□□ 1.71
CASD1Q96PB1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASD1Q96PB1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASD1Q96PB1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASD1Q96PB1 TSPY9P-201ENST00000440215 945 ntBASIC25.75■■□□□ 1.71
CASD1Q96PB1 TSPY11P-201ENST00000442607 1045 ntBASIC25.75■■□□□ 1.71
CASD1Q96PB1 MIR4281-201ENST00000580852 62 ntBASIC25.75■■□□□ 1.71
CASD1Q96PB1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.75■■□□□ 1.71
CASD1Q96PB1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASD1Q96PB1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.74■■□□□ 1.71
CASD1Q96PB1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CASD1Q96PB1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CASD1Q96PB1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASD1Q96PB1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.73■■□□□ 1.71
CASD1Q96PB1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CASD1Q96PB1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.73■■□□□ 1.71
CASD1Q96PB1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms