Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 THA1P-201ENST00000590384 1145 ntBASIC19.47■□□□□ 0.71
ZNF48Q96MX3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 AC131212.1-201ENST00000613771 668 ntBASIC19.47■□□□□ 0.71
ZNF48Q96MX3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF48Q96MX3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF48Q96MX3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF48Q96MX3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 AC239859.2-201ENST00000444165 318 ntBASIC19.44■□□□□ 0.7
ZNF48Q96MX3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF48Q96MX3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF48Q96MX3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF48Q96MX3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF48Q96MX3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF48Q96MX3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF48Q96MX3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF48Q96MX3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF48Q96MX3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF48Q96MX3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF48Q96MX3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF48Q96MX3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF48Q96MX3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF48Q96MX3 AL356441.2-201ENST00000443009 864 ntBASIC19.41■□□□□ 0.7
ZNF48Q96MX3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF48Q96MX3 AC142472.1-201ENST00000612013 1741 ntBASIC19.41■□□□□ 0.7
ZNF48Q96MX3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF48Q96MX3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF48Q96MX3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 KRT18P10-201ENST00000388836 1287 ntBASIC19.38■□□□□ 0.69
ZNF48Q96MX3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 Z92544.1-202ENST00000571933 1220 ntBASIC19.38■□□□□ 0.69
ZNF48Q96MX3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF48Q96MX3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF48Q96MX3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF48Q96MX3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ZNF48Q96MX3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF48Q96MX3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.37■□□□□ 0.69
ZNF48Q96MX3 AC135731.1-201ENST00000569415 2548 ntBASIC19.37■□□□□ 0.69
ZNF48Q96MX3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF48Q96MX3 AP004609.3-201ENST00000610705 1884 ntBASIC19.35■□□□□ 0.69
ZNF48Q96MX3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF48Q96MX3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF48Q96MX3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ZNF48Q96MX3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF48Q96MX3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF48Q96MX3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 AC022616.5-201ENST00000518796 181 ntBASIC19.34■□□□□ 0.69
ZNF48Q96MX3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF48Q96MX3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms