Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
DDX11Q96FC9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
DDX11Q96FC9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.3■■■□□ 2.12
DDX11Q96FC9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.3■■■□□ 2.12
DDX11Q96FC9 AC010501.1-201ENST00000606270 1962 ntBASIC28.3■■■□□ 2.12
DDX11Q96FC9 AC135731.1-201ENST00000569415 2548 ntBASIC28.29■■■□□ 2.12
DDX11Q96FC9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX11Q96FC9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX11Q96FC9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
DDX11Q96FC9 SPCS2P3-201ENST00000500401 656 ntBASIC28.29■■■□□ 2.12
DDX11Q96FC9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.28■■■□□ 2.12
DDX11Q96FC9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DDX11Q96FC9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.28■■■□□ 2.12
DDX11Q96FC9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
DDX11Q96FC9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX11Q96FC9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.27■■■□□ 2.12
DDX11Q96FC9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX11Q96FC9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DDX11Q96FC9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
DDX11Q96FC9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
DDX11Q96FC9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
DDX11Q96FC9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
DDX11Q96FC9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX11Q96FC9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX11Q96FC9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.25■■■□□ 2.11
DDX11Q96FC9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.25■■■□□ 2.11
DDX11Q96FC9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
DDX11Q96FC9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
DDX11Q96FC9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
DDX11Q96FC9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DDX11Q96FC9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
DDX11Q96FC9 MIR6765-201ENST00000614092 87 ntBASIC28.24■■■□□ 2.11
DDX11Q96FC9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.24■■■□□ 2.11
DDX11Q96FC9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
DDX11Q96FC9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
DDX11Q96FC9 AC018755.3-202ENST00000596210 929 ntBASIC28.23■■■□□ 2.11
DDX11Q96FC9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DDX11Q96FC9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX11Q96FC9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
DDX11Q96FC9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DDX11Q96FC9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DDX11Q96FC9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.22■■■□□ 2.11
DDX11Q96FC9 AC139795.1-202ENST00000500444 432 ntBASIC28.22■■■□□ 2.11
DDX11Q96FC9 AC010980.1-201ENST00000587192 1142 ntBASIC28.22■■■□□ 2.11
DDX11Q96FC9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
DDX11Q96FC9 AC074183.2-201ENST00000623112 922 ntBASIC28.22■■■□□ 2.11
DDX11Q96FC9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.22■■■□□ 2.11
DDX11Q96FC9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX11Q96FC9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
DDX11Q96FC9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.21■■■□□ 2.11
DDX11Q96FC9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.21■■■□□ 2.11
DDX11Q96FC9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DDX11Q96FC9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
DDX11Q96FC9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
DDX11Q96FC9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
DDX11Q96FC9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.2■■■□□ 2.11
DDX11Q96FC9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
DDX11Q96FC9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
DDX11Q96FC9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX11Q96FC9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX11Q96FC9 AC096887.2-201ENST00000623443 1957 ntBASIC28.2■■■□□ 2.1
DDX11Q96FC9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
DDX11Q96FC9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DDX11Q96FC9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.2■■■□□ 2.1
DDX11Q96FC9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
DDX11Q96FC9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.19■■■□□ 2.1
DDX11Q96FC9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.19■■■□□ 2.1
DDX11Q96FC9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.19■■■□□ 2.1
DDX11Q96FC9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
DDX11Q96FC9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
DDX11Q96FC9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX11Q96FC9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX11Q96FC9 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.18■■■□□ 2.1
DDX11Q96FC9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
DDX11Q96FC9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.17■■■□□ 2.1
DDX11Q96FC9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
DDX11Q96FC9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX11Q96FC9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.17■■■□□ 2.1
DDX11Q96FC9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.17■■■□□ 2.1
DDX11Q96FC9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DDX11Q96FC9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.16■■■□□ 2.1
DDX11Q96FC9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX11Q96FC9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.16■■■□□ 2.1
DDX11Q96FC9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.16■■■□□ 2.1
DDX11Q96FC9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.15■■■□□ 2.1
DDX11Q96FC9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.15■■■□□ 2.1
DDX11Q96FC9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.15■■■□□ 2.1
DDX11Q96FC9 KRT8P33-201ENST00000508125 1423 ntBASIC28.15■■■□□ 2.1
DDX11Q96FC9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
DDX11Q96FC9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.15■■■□□ 2.1
DDX11Q96FC9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.14■■■□□ 2.1
DDX11Q96FC9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
DDX11Q96FC9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DDX11Q96FC9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.14■■■□□ 2.1
DDX11Q96FC9 AL451085.2-201ENST00000605085 799 ntBASIC28.14■■■□□ 2.1
DDX11Q96FC9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
DDX11Q96FC9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
DDX11Q96FC9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
DDX11Q96FC9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DDX11Q96FC9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms