Protein–RNA interactions for Protein: Q969J2

ZKSCAN4, Zinc finger protein with KRAB and SCAN domains 4, humanhuman

Predicted RBP Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4Q969J2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZKSCAN4Q969J2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ZKSCAN4Q969J2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZKSCAN4Q969J2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZKSCAN4Q969J2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZKSCAN4Q969J2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.28■■■□□ 2.12
ZKSCAN4Q969J2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.28■■■□□ 2.12
ZKSCAN4Q969J2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.28■■■□□ 2.12
ZKSCAN4Q969J2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZKSCAN4Q969J2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.28■■■□□ 2.12
ZKSCAN4Q969J2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.27■■■□□ 2.12
ZKSCAN4Q969J2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
ZKSCAN4Q969J2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
ZKSCAN4Q969J2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZKSCAN4Q969J2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
ZKSCAN4Q969J2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ZKSCAN4Q969J2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZKSCAN4Q969J2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.25■■■□□ 2.11
ZKSCAN4Q969J2 AC142472.1-201ENST00000612013 1741 ntBASIC28.24■■■□□ 2.11
ZKSCAN4Q969J2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.24■■■□□ 2.11
ZKSCAN4Q969J2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ZKSCAN4Q969J2 AC092028.1-203ENST00000608262 953 ntBASIC28.24■■■□□ 2.11
ZKSCAN4Q969J2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.24■■■□□ 2.11
ZKSCAN4Q969J2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ZKSCAN4Q969J2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.23■■■□□ 2.11
ZKSCAN4Q969J2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.23■■■□□ 2.11
ZKSCAN4Q969J2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.23■■■□□ 2.11
ZKSCAN4Q969J2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 MIR638-201ENST00000385237 100 ntBASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZKSCAN4Q969J2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZKSCAN4Q969J2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZKSCAN4Q969J2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZKSCAN4Q969J2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.2■■■□□ 2.1
ZKSCAN4Q969J2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.2■■■□□ 2.1
ZKSCAN4Q969J2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.2■■■□□ 2.1
ZKSCAN4Q969J2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.2■■■□□ 2.1
ZKSCAN4Q969J2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.19■■■□□ 2.1
ZKSCAN4Q969J2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.19■■■□□ 2.1
ZKSCAN4Q969J2 MIR4281-201ENST00000580852 62 ntBASIC28.19■■■□□ 2.1
ZKSCAN4Q969J2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 AC131281.2-201ENST00000520478 145 ntBASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.18■■■□□ 2.1
ZKSCAN4Q969J2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN4Q969J2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZKSCAN4Q969J2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.17■■■□□ 2.1
ZKSCAN4Q969J2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.17■■■□□ 2.1
ZKSCAN4Q969J2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZKSCAN4Q969J2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZKSCAN4Q969J2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.15■■■□□ 2.1
ZKSCAN4Q969J2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZKSCAN4Q969J2 AP004609.3-201ENST00000610705 1884 ntBASIC28.15■■■□□ 2.1
ZKSCAN4Q969J2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.14■■■□□ 2.1
ZKSCAN4Q969J2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
ZKSCAN4Q969J2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN4Q969J2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN4Q969J2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZKSCAN4Q969J2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.13■■■□□ 2.09
ZKSCAN4Q969J2 AL139246.5-201ENST00000606645 996 ntBASIC28.13■■■□□ 2.09
ZKSCAN4Q969J2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.12■■■□□ 2.09
ZKSCAN4Q969J2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms