Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 LONRF2P2-201ENST00000439212 571 ntBASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.9■■□□□ 1.9
ATP6V0A1Q93050 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ATP6V0A1Q93050 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
ATP6V0A1Q93050 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
ATP6V0A1Q93050 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 GUSBP5-201ENST00000418136 578 ntBASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ATP6V0A1Q93050 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.87■■□□□ 1.89
ATP6V0A1Q93050 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
ATP6V0A1Q93050 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.86■■□□□ 1.89
ATP6V0A1Q93050 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
ATP6V0A1Q93050 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V0A1Q93050 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.83■■□□□ 1.89
ATP6V0A1Q93050 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ATP6V0A1Q93050 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ATP6V0A1Q93050 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V0A1Q93050 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
ATP6V0A1Q93050 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V0A1Q93050 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V0A1Q93050 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.82■■□□□ 1.88
ATP6V0A1Q93050 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
ATP6V0A1Q93050 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.81■■□□□ 1.88
ATP6V0A1Q93050 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ATP6V0A1Q93050 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 AC131212.1-201ENST00000613771 668 ntBASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
ATP6V0A1Q93050 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V0A1Q93050 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.79■■□□□ 1.88
ATP6V0A1Q93050 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.79■■□□□ 1.88
ATP6V0A1Q93050 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.79■■□□□ 1.88
ATP6V0A1Q93050 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.78■■□□□ 1.88
ATP6V0A1Q93050 THA1P-201ENST00000590384 1145 ntBASIC26.78■■□□□ 1.88
ATP6V0A1Q93050 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.78■■□□□ 1.88
ATP6V0A1Q93050 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V0A1Q93050 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 AC239859.2-201ENST00000444165 318 ntBASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.77■■□□□ 1.88
ATP6V0A1Q93050 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.88
ATP6V0A1Q93050 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.76■■□□□ 1.87
ATP6V0A1Q93050 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V0A1Q93050 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V0A1Q93050 AL592295.1-201ENST00000400984 884 ntBASIC26.76■■□□□ 1.87
ATP6V0A1Q93050 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.76■■□□□ 1.87
ATP6V0A1Q93050 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
ATP6V0A1Q93050 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V0A1Q93050 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.74■■□□□ 1.87
ATP6V0A1Q93050 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V0A1Q93050 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.72■■□□□ 1.87
ATP6V0A1Q93050 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms