Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 RASSF1-AS1-201ENST00000629828 790 ntBASIC39.75■■■■□ 3.95
CHMP7Q8WUX9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
CHMP7Q8WUX9 AK3-203ENST00000447596 705 ntTSL 2 BASIC39.74■■■■□ 3.95
CHMP7Q8WUX9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC39.74■■■■□ 3.95
CHMP7Q8WUX9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC39.73■■■■□ 3.95
CHMP7Q8WUX9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC39.73■■■■□ 3.95
CHMP7Q8WUX9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC39.73■■■■□ 3.95
CHMP7Q8WUX9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC39.72■■■■□ 3.95
CHMP7Q8WUX9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
CHMP7Q8WUX9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC39.71■■■■□ 3.95
CHMP7Q8WUX9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC39.7■■■■□ 3.95
CHMP7Q8WUX9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC39.7■■■■□ 3.95
CHMP7Q8WUX9 AL031432.3-201ENST00000607698 485 ntBASIC39.69■■■■□ 3.94
CHMP7Q8WUX9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC39.69■■■■□ 3.94
CHMP7Q8WUX9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
CHMP7Q8WUX9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC39.68■■■■□ 3.94
CHMP7Q8WUX9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.68■■■■□ 3.94
CHMP7Q8WUX9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC39.67■■■■□ 3.94
CHMP7Q8WUX9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC39.67■■■■□ 3.94
CHMP7Q8WUX9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC39.66■■■■□ 3.94
CHMP7Q8WUX9 SUDS3P1-201ENST00000505831 966 ntBASIC39.66■■■■□ 3.94
CHMP7Q8WUX9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC39.66■■■■□ 3.94
CHMP7Q8WUX9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC39.66■■■■□ 3.94
CHMP7Q8WUX9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC39.66■■■■□ 3.94
CHMP7Q8WUX9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
CHMP7Q8WUX9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC39.64■■■■□ 3.94
CHMP7Q8WUX9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC39.64■■■■□ 3.94
CHMP7Q8WUX9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC39.64■■■■□ 3.94
CHMP7Q8WUX9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC39.64■■■■□ 3.94
CHMP7Q8WUX9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
CHMP7Q8WUX9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC39.63■■■■□ 3.93
CHMP7Q8WUX9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC39.63■■■■□ 3.93
CHMP7Q8WUX9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC39.63■■■■□ 3.93
CHMP7Q8WUX9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC39.63■■■■□ 3.93
CHMP7Q8WUX9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
CHMP7Q8WUX9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC39.62■■■■□ 3.93
CHMP7Q8WUX9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC39.62■■■■□ 3.93
CHMP7Q8WUX9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
CHMP7Q8WUX9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC39.61■■■■□ 3.93
CHMP7Q8WUX9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC39.6■■■■□ 3.93
CHMP7Q8WUX9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
CHMP7Q8WUX9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC39.6■■■■□ 3.93
CHMP7Q8WUX9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
CHMP7Q8WUX9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC39.6■■■■□ 3.93
CHMP7Q8WUX9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC39.59■■■■□ 3.93
CHMP7Q8WUX9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC39.59■■■■□ 3.93
CHMP7Q8WUX9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC39.58■■■■□ 3.93
CHMP7Q8WUX9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
CHMP7Q8WUX9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC39.58■■■■□ 3.93
CHMP7Q8WUX9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
CHMP7Q8WUX9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC39.58■■■■□ 3.93
CHMP7Q8WUX9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC39.57■■■■□ 3.93
CHMP7Q8WUX9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC39.57■■■■□ 3.93
CHMP7Q8WUX9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
CHMP7Q8WUX9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
CHMP7Q8WUX9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
CHMP7Q8WUX9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC39.57■■■■□ 3.92
CHMP7Q8WUX9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC39.56■■■■□ 3.92
CHMP7Q8WUX9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC39.56■■■■□ 3.92
CHMP7Q8WUX9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC39.56■■■■□ 3.92
CHMP7Q8WUX9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC39.55■■■■□ 3.92
CHMP7Q8WUX9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC39.55■■■■□ 3.92
CHMP7Q8WUX9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
CHMP7Q8WUX9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC39.54■■■■□ 3.92
CHMP7Q8WUX9 CD72-202ENST00000378430 585 ntTSL 3 BASIC39.54■■■■□ 3.92
CHMP7Q8WUX9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
CHMP7Q8WUX9 UNC93B3-201ENST00000308076 687 ntBASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
CHMP7Q8WUX9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC39.52■■■■□ 3.92
CHMP7Q8WUX9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC39.52■■■■□ 3.92
CHMP7Q8WUX9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC39.52■■■■□ 3.92
CHMP7Q8WUX9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CHMP7Q8WUX9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC39.51■■■■□ 3.92
CHMP7Q8WUX9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC39.51■■■■□ 3.92
CHMP7Q8WUX9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC39.5■■■■□ 3.91
CHMP7Q8WUX9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC39.5■■■■□ 3.91
CHMP7Q8WUX9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC39.5■■■■□ 3.91
CHMP7Q8WUX9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CHMP7Q8WUX9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 GAK-223ENST00000628912 497 ntTSL 5 BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
CHMP7Q8WUX9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC39.49■■■■□ 3.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms