Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD6Q8TD26 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD6Q8TD26 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD6Q8TD26 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.33■■□□□ 1.17
CHD6Q8TD26 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHD6Q8TD26 AC120024.1-201ENST00000562672 995 ntBASIC22.33■■□□□ 1.16
CHD6Q8TD26 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.33■■□□□ 1.16
CHD6Q8TD26 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CHD6Q8TD26 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.32■■□□□ 1.16
CHD6Q8TD26 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.32■■□□□ 1.16
CHD6Q8TD26 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.32■■□□□ 1.16
CHD6Q8TD26 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD6Q8TD26 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CHD6Q8TD26 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.31■■□□□ 1.16
CHD6Q8TD26 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.3■■□□□ 1.16
CHD6Q8TD26 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.3■■□□□ 1.16
CHD6Q8TD26 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CHD6Q8TD26 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.29■■□□□ 1.16
CHD6Q8TD26 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD6Q8TD26 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHD6Q8TD26 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHD6Q8TD26 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD6Q8TD26 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.29■■□□□ 1.16
CHD6Q8TD26 IRS3P-201ENST00000223076 1006 ntBASIC22.28■■□□□ 1.16
CHD6Q8TD26 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.27■■□□□ 1.16
CHD6Q8TD26 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHD6Q8TD26 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CHD6Q8TD26 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHD6Q8TD26 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 CA15P2-201ENST00000611168 834 ntBASIC22.26■■□□□ 1.15
CHD6Q8TD26 TMEM191A-211ENST00000637163 1067 ntBASIC22.26■■□□□ 1.15
CHD6Q8TD26 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.26■■□□□ 1.15
CHD6Q8TD26 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.25■■□□□ 1.15
CHD6Q8TD26 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.25■■□□□ 1.15
CHD6Q8TD26 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CHD6Q8TD26 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CHD6Q8TD26 KRT18P5-201ENST00000436075 1291 ntBASIC22.24■■□□□ 1.15
CHD6Q8TD26 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHD6Q8TD26 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.24■■□□□ 1.15
CHD6Q8TD26 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.24■■□□□ 1.15
CHD6Q8TD26 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.24■■□□□ 1.15
CHD6Q8TD26 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHD6Q8TD26 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD6Q8TD26 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD6Q8TD26 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD6Q8TD26 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHD6Q8TD26 AC093827.2-201ENST00000512654 315 ntBASIC22.22■■□□□ 1.15
CHD6Q8TD26 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD6Q8TD26 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CHD6Q8TD26 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD6Q8TD26 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD6Q8TD26 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD6Q8TD26 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
CHD6Q8TD26 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD6Q8TD26 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.22■■□□□ 1.15
CHD6Q8TD26 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD6Q8TD26 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.21■■□□□ 1.15
CHD6Q8TD26 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD6Q8TD26 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CHD6Q8TD26 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD6Q8TD26 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD6Q8TD26 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.2■■□□□ 1.14
CHD6Q8TD26 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD6Q8TD26 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.2■■□□□ 1.14
CHD6Q8TD26 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.19■■□□□ 1.14
CHD6Q8TD26 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.19■■□□□ 1.14
CHD6Q8TD26 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD6Q8TD26 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD6Q8TD26 AC004911.1-201ENST00000416316 871 ntBASIC22.18■■□□□ 1.14
CHD6Q8TD26 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.18■■□□□ 1.14
CHD6Q8TD26 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD6Q8TD26 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD6Q8TD26 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.18■■□□□ 1.14
CHD6Q8TD26 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD6Q8TD26 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD6Q8TD26 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.18■■□□□ 1.14
CHD6Q8TD26 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD6Q8TD26 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHD6Q8TD26 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.17■■□□□ 1.14
CHD6Q8TD26 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.17■■□□□ 1.14
CHD6Q8TD26 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD6Q8TD26 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD6Q8TD26 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHD6Q8TD26 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CHD6Q8TD26 RAP2CP1-201ENST00000605103 478 ntBASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms