Protein–RNA interactions for Protein: Q8TCT6

SPPL3, Signal peptide peptidase-like 3, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3Q8TCT6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPPL3Q8TCT6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPPL3Q8TCT6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 MIR4281-201ENST00000580852 62 ntBASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPPL3Q8TCT6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SPPL3Q8TCT6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SPPL3Q8TCT6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.58■■□□□ 1.69
SPPL3Q8TCT6 LINC01003-201ENST00000564834 1764 ntBASIC25.58■■□□□ 1.69
SPPL3Q8TCT6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPPL3Q8TCT6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.57■■□□□ 1.68
SPPL3Q8TCT6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPPL3Q8TCT6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPPL3Q8TCT6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPPL3Q8TCT6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SPPL3Q8TCT6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SPPL3Q8TCT6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 AL136116.3-201ENST00000402907 1138 ntBASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SPPL3Q8TCT6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SPPL3Q8TCT6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.54■■□□□ 1.68
SPPL3Q8TCT6 AL117332.1-201ENST00000622628 974 ntBASIC25.54■■□□□ 1.68
SPPL3Q8TCT6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
SPPL3Q8TCT6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SPPL3Q8TCT6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 AC010997.5-201ENST00000609182 354 ntBASIC25.53■■□□□ 1.68
SPPL3Q8TCT6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SPPL3Q8TCT6 AC142472.1-201ENST00000612013 1741 ntBASIC25.52■■□□□ 1.68
SPPL3Q8TCT6 MIR3621-201ENST00000580529 85 ntBASIC25.52■■□□□ 1.68
SPPL3Q8TCT6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
SPPL3Q8TCT6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.52■■□□□ 1.68
SPPL3Q8TCT6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
SPPL3Q8TCT6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.51■■□□□ 1.67
SPPL3Q8TCT6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPPL3Q8TCT6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SPPL3Q8TCT6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 MIR6724-1-201ENST00000616420 92 ntBASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 MIR6724-2-201ENST00000616483 92 ntBASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 MIR6724-4-201ENST00000617390 92 ntBASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 MIR6724-3-201ENST00000622482 92 ntBASIC25.5■■□□□ 1.67
SPPL3Q8TCT6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 AC110285.6-201ENST00000617652 491 ntBASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
SPPL3Q8TCT6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SPPL3Q8TCT6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.47■■□□□ 1.67
SPPL3Q8TCT6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.47■■□□□ 1.67
SPPL3Q8TCT6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
SPPL3Q8TCT6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.46■■□□□ 1.67
SPPL3Q8TCT6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPPL3Q8TCT6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.45■■□□□ 1.66
SPPL3Q8TCT6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SPPL3Q8TCT6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms