Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 AC009831.1-201ENST00000580420 1582 ntBASIC24.71■■□□□ 1.55
PCDH19Q8TAB3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.7■■□□□ 1.55
PCDH19Q8TAB3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
PCDH19Q8TAB3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH19Q8TAB3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH19Q8TAB3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH19Q8TAB3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 AC022211.4-201ENST00000625094 2161 ntBASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 NTF6A-201ENST00000591175 560 ntBASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH19Q8TAB3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 AC133552.2-201ENST00000619106 1032 ntBASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH19Q8TAB3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH19Q8TAB3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH19Q8TAB3 AC135731.1-201ENST00000569415 2548 ntBASIC24.65■■□□□ 1.54
PCDH19Q8TAB3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH19Q8TAB3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDH19Q8TAB3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH19Q8TAB3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.63■■□□□ 1.53
PCDH19Q8TAB3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 AC142381.3-201ENST00000568208 1670 ntBASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH19Q8TAB3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDH19Q8TAB3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDH19Q8TAB3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH19Q8TAB3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH19Q8TAB3 AC138932.3-201ENST00000567634 1902 ntBASIC24.6■■□□□ 1.53
PCDH19Q8TAB3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH19Q8TAB3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH19Q8TAB3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH19Q8TAB3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH19Q8TAB3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH19Q8TAB3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
PCDH19Q8TAB3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH19Q8TAB3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH19Q8TAB3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDH19Q8TAB3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH19Q8TAB3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDH19Q8TAB3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH19Q8TAB3 AL592293.1-201ENST00000502889 1188 ntBASIC24.57■■□□□ 1.52
PCDH19Q8TAB3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDH19Q8TAB3 AC012354.3-201ENST00000623734 483 ntBASIC24.56■■□□□ 1.52
PCDH19Q8TAB3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 366.9 ms