Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC38.02■■■■□ 3.68
CFAP43Q8NDM7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC38.02■■■■□ 3.68
CFAP43Q8NDM7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CFAP43Q8NDM7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CFAP43Q8NDM7 AC110285.6-201ENST00000617652 491 ntBASIC38.01■■■■□ 3.68
CFAP43Q8NDM7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC38.01■■■■□ 3.68
CFAP43Q8NDM7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC38.01■■■■□ 3.67
CFAP43Q8NDM7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC38■■■■□ 3.67
CFAP43Q8NDM7 AC022616.5-201ENST00000518796 181 ntBASIC38■■■■□ 3.67
CFAP43Q8NDM7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
CFAP43Q8NDM7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC37.99■■■■□ 3.67
CFAP43Q8NDM7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CFAP43Q8NDM7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CFAP43Q8NDM7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CFAP43Q8NDM7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
CFAP43Q8NDM7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
CFAP43Q8NDM7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
CFAP43Q8NDM7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC37.97■■■■□ 3.67
CFAP43Q8NDM7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC37.96■■■■□ 3.67
CFAP43Q8NDM7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
CFAP43Q8NDM7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC37.96■■■■□ 3.67
CFAP43Q8NDM7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC37.96■■■■□ 3.67
CFAP43Q8NDM7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
CFAP43Q8NDM7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
CFAP43Q8NDM7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.66
CFAP43Q8NDM7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC37.94■■■■□ 3.66
CFAP43Q8NDM7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC37.94■■■■□ 3.66
CFAP43Q8NDM7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
CFAP43Q8NDM7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC37.93■■■■□ 3.66
CFAP43Q8NDM7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
CFAP43Q8NDM7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
CFAP43Q8NDM7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC37.93■■■■□ 3.66
CFAP43Q8NDM7 AC137630.3-201ENST00000607245 391 ntBASIC37.92■■■■□ 3.66
CFAP43Q8NDM7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC37.92■■■■□ 3.66
CFAP43Q8NDM7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
CFAP43Q8NDM7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
CFAP43Q8NDM7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
CFAP43Q8NDM7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC37.91■■■■□ 3.66
CFAP43Q8NDM7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC37.91■■■■□ 3.66
CFAP43Q8NDM7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC37.91■■■■□ 3.66
CFAP43Q8NDM7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 AC021242.3-201ENST00000607598 1377 ntBASIC37.9■■■■□ 3.66
CFAP43Q8NDM7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 AP004609.3-201ENST00000610705 1884 ntBASIC37.89■■■■□ 3.66
CFAP43Q8NDM7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
CFAP43Q8NDM7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.65
CFAP43Q8NDM7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
CFAP43Q8NDM7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
CFAP43Q8NDM7 AL136116.3-201ENST00000402907 1138 ntBASIC37.87■■■■□ 3.65
CFAP43Q8NDM7 SRR-208ENST00000576848 588 ntTSL 4 BASIC37.87■■■■□ 3.65
CFAP43Q8NDM7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC37.87■■■■□ 3.65
CFAP43Q8NDM7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC37.86■■■■□ 3.65
CFAP43Q8NDM7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC37.86■■■■□ 3.65
CFAP43Q8NDM7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.86■■■■□ 3.65
CFAP43Q8NDM7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
CFAP43Q8NDM7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 AL117332.1-201ENST00000622628 974 ntBASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 RARRES2P6-201ENST00000567333 442 ntBASIC37.85■■■■□ 3.65
CFAP43Q8NDM7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC37.84■■■■□ 3.65
CFAP43Q8NDM7 KRT18P24-201ENST00000344739 1156 ntBASIC37.84■■■■□ 3.65
CFAP43Q8NDM7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC37.84■■■■□ 3.65
CFAP43Q8NDM7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC37.83■■■■□ 3.65
CFAP43Q8NDM7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
CFAP43Q8NDM7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
CFAP43Q8NDM7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC37.83■■■■□ 3.65
CFAP43Q8NDM7 TSPY9P-201ENST00000440215 945 ntBASIC37.82■■■■□ 3.65
CFAP43Q8NDM7 TSPY11P-201ENST00000442607 1045 ntBASIC37.82■■■■□ 3.65
CFAP43Q8NDM7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC37.82■■■■□ 3.65
CFAP43Q8NDM7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
CFAP43Q8NDM7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
CFAP43Q8NDM7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC37.82■■■■□ 3.64
CFAP43Q8NDM7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
CFAP43Q8NDM7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC37.82■■■■□ 3.64
CFAP43Q8NDM7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CFAP43Q8NDM7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC37.81■■■■□ 3.64
CFAP43Q8NDM7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
CFAP43Q8NDM7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC37.81■■■■□ 3.64
CFAP43Q8NDM7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CFAP43Q8NDM7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC37.8■■■■□ 3.64
CFAP43Q8NDM7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC37.79■■■■□ 3.64
CFAP43Q8NDM7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC37.79■■■■□ 3.64
CFAP43Q8NDM7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC37.79■■■■□ 3.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms