Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
LINC00116Q8NCU8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC30.85■■■□□ 2.53
LINC00116Q8NCU8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
LINC00116Q8NCU8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
LINC00116Q8NCU8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
LINC00116Q8NCU8 BX255925.1-201ENST00000566954 1854 ntBASIC30.83■■■□□ 2.53
LINC00116Q8NCU8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.83■■■□□ 2.53
LINC00116Q8NCU8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LINC00116Q8NCU8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
LINC00116Q8NCU8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.83■■■□□ 2.53
LINC00116Q8NCU8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
LINC00116Q8NCU8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.82■■■□□ 2.52
LINC00116Q8NCU8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LINC00116Q8NCU8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
LINC00116Q8NCU8 MIR3621-201ENST00000580529 85 ntBASIC30.81■■■□□ 2.52
LINC00116Q8NCU8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.81■■■□□ 2.52
LINC00116Q8NCU8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.81■■■□□ 2.52
LINC00116Q8NCU8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LINC00116Q8NCU8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
LINC00116Q8NCU8 DRD5P2-201ENST00000421395 2012 ntBASIC30.8■■■□□ 2.52
LINC00116Q8NCU8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC30.79■■■□□ 2.52
LINC00116Q8NCU8 AC010997.5-201ENST00000609182 354 ntBASIC30.79■■■□□ 2.52
LINC00116Q8NCU8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LINC00116Q8NCU8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LINC00116Q8NCU8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.78■■■□□ 2.52
LINC00116Q8NCU8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
LINC00116Q8NCU8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
LINC00116Q8NCU8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 MIR4466-201ENST00000606121 54 ntBASIC30.77■■■□□ 2.52
LINC00116Q8NCU8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
LINC00116Q8NCU8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
LINC00116Q8NCU8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LINC00116Q8NCU8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
LINC00116Q8NCU8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 MIR6724-1-201ENST00000616420 92 ntBASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 MIR6724-2-201ENST00000616483 92 ntBASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 MIR6724-4-201ENST00000617390 92 ntBASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 MIR6724-3-201ENST00000622482 92 ntBASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
LINC00116Q8NCU8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LINC00116Q8NCU8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LINC00116Q8NCU8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.74■■■□□ 2.51
LINC00116Q8NCU8 AC005837.3-201ENST00000612163 286 ntBASIC30.74■■■□□ 2.51
LINC00116Q8NCU8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LINC00116Q8NCU8 AC096631.2-201ENST00000436136 790 ntBASIC30.73■■■□□ 2.51
LINC00116Q8NCU8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.73■■■□□ 2.51
LINC00116Q8NCU8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LINC00116Q8NCU8 LINC01003-201ENST00000564834 1764 ntBASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LINC00116Q8NCU8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 MTDHP2-201ENST00000601468 714 ntBASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
LINC00116Q8NCU8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.7■■■□□ 2.51
LINC00116Q8NCU8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.7■■■□□ 2.51
LINC00116Q8NCU8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
LINC00116Q8NCU8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LINC00116Q8NCU8 AC142472.1-201ENST00000612013 1741 ntBASIC30.68■■■□□ 2.5
LINC00116Q8NCU8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.68■■■□□ 2.5
LINC00116Q8NCU8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LINC00116Q8NCU8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LINC00116Q8NCU8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms