Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 BX664725.1-201ENST00000438252 379 ntBASIC22.55■■□□□ 1.2
EXD3Q8N9H8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.55■■□□□ 1.2
EXD3Q8N9H8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
EXD3Q8N9H8 RPS2P7-201ENST00000447334 885 ntBASIC22.54■■□□□ 1.2
EXD3Q8N9H8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
EXD3Q8N9H8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.54■■□□□ 1.2
EXD3Q8N9H8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
EXD3Q8N9H8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.52■■□□□ 1.2
EXD3Q8N9H8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EXD3Q8N9H8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EXD3Q8N9H8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.49■■□□□ 1.19
EXD3Q8N9H8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.49■■□□□ 1.19
EXD3Q8N9H8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
EXD3Q8N9H8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.47■■□□□ 1.19
EXD3Q8N9H8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 TSPY9P-201ENST00000440215 945 ntBASIC22.46■■□□□ 1.19
EXD3Q8N9H8 TSPY11P-201ENST00000442607 1045 ntBASIC22.46■■□□□ 1.19
EXD3Q8N9H8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.46■■□□□ 1.19
EXD3Q8N9H8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 AC131281.2-201ENST00000520478 145 ntBASIC22.45■■□□□ 1.18
EXD3Q8N9H8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.45■■□□□ 1.18
EXD3Q8N9H8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
EXD3Q8N9H8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
EXD3Q8N9H8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
EXD3Q8N9H8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
EXD3Q8N9H8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.43■■□□□ 1.18
EXD3Q8N9H8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.42■■□□□ 1.18
EXD3Q8N9H8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EXD3Q8N9H8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.41■■□□□ 1.18
EXD3Q8N9H8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
EXD3Q8N9H8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms