Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHPFQ8IZ52 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHPFQ8IZ52 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 AL356441.2-201ENST00000443009 864 ntBASIC24.36■■□□□ 1.49
CHPFQ8IZ52 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHPFQ8IZ52 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHPFQ8IZ52 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
CHPFQ8IZ52 AL592295.1-201ENST00000400984 884 ntBASIC24.35■■□□□ 1.49
CHPFQ8IZ52 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHPFQ8IZ52 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHPFQ8IZ52 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHPFQ8IZ52 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.34■■□□□ 1.49
CHPFQ8IZ52 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHPFQ8IZ52 BX664725.1-201ENST00000438252 379 ntBASIC24.33■■□□□ 1.49
CHPFQ8IZ52 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CHPFQ8IZ52 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.33■■□□□ 1.49
CHPFQ8IZ52 KRT125P-201ENST00000546827 989 ntBASIC24.33■■□□□ 1.49
CHPFQ8IZ52 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHPFQ8IZ52 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHPFQ8IZ52 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 KRT18P24-201ENST00000344739 1156 ntBASIC24.32■■□□□ 1.48
CHPFQ8IZ52 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHPFQ8IZ52 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHPFQ8IZ52 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHPFQ8IZ52 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHPFQ8IZ52 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
CHPFQ8IZ52 AL121749.1-202ENST00000609313 2153 ntBASIC24.3■■□□□ 1.48
CHPFQ8IZ52 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHPFQ8IZ52 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHPFQ8IZ52 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHPFQ8IZ52 MIR4787-201ENST00000607364 84 ntBASIC24.27■■□□□ 1.48
CHPFQ8IZ52 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHPFQ8IZ52 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHPFQ8IZ52 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHPFQ8IZ52 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 AC120024.1-201ENST00000562672 995 ntBASIC24.26■■□□□ 1.47
CHPFQ8IZ52 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHPFQ8IZ52 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CHPFQ8IZ52 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHPFQ8IZ52 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHPFQ8IZ52 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHPFQ8IZ52 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHPFQ8IZ52 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHPFQ8IZ52 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms