Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 SLC25A24-204ENST00000569674 2357 ntBASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 AC010501.1-201ENST00000606270 1962 ntBASIC21.54■■□□□ 1.04
CROCCP3Q8IVE0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CROCCP3Q8IVE0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.52■■□□□ 1.04
CROCCP3Q8IVE0 AC142472.1-201ENST00000612013 1741 ntBASIC21.52■■□□□ 1.03
CROCCP3Q8IVE0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CROCCP3Q8IVE0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CROCCP3Q8IVE0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CROCCP3Q8IVE0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 C1orf229-201ENST00000623686 2258 ntBASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CROCCP3Q8IVE0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CROCCP3Q8IVE0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 AL121603.2-201ENST00000557373 2117 ntBASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CROCCP3Q8IVE0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CROCCP3Q8IVE0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CROCCP3Q8IVE0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CROCCP3Q8IVE0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms