Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.8■■□□□ 1.88
TRIM50Q86XT4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM50Q86XT4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TRIM50Q86XT4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRIM50Q86XT4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM50Q86XT4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM50Q86XT4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TRIM50Q86XT4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM50Q86XT4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.77■■□□□ 1.88
TRIM50Q86XT4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.77■■□□□ 1.88
TRIM50Q86XT4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
TRIM50Q86XT4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
TRIM50Q86XT4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 AC239859.2-201ENST00000444165 318 ntBASIC26.75■■□□□ 1.87
TRIM50Q86XT4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TRIM50Q86XT4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.74■■□□□ 1.87
TRIM50Q86XT4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRIM50Q86XT4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.73■■□□□ 1.87
TRIM50Q86XT4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.72■■□□□ 1.87
TRIM50Q86XT4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM50Q86XT4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
TRIM50Q86XT4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM50Q86XT4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRIM50Q86XT4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
TRIM50Q86XT4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.71■■□□□ 1.87
TRIM50Q86XT4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.71■■□□□ 1.87
TRIM50Q86XT4 AC022616.5-201ENST00000518796 181 ntBASIC26.71■■□□□ 1.87
TRIM50Q86XT4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.7■■□□□ 1.87
TRIM50Q86XT4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TRIM50Q86XT4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRIM50Q86XT4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TRIM50Q86XT4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
TRIM50Q86XT4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRIM50Q86XT4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRIM50Q86XT4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
TRIM50Q86XT4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRIM50Q86XT4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.68■■□□□ 1.86
TRIM50Q86XT4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
TRIM50Q86XT4 THA1P-201ENST00000590384 1145 ntBASIC26.68■■□□□ 1.86
TRIM50Q86XT4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.68■■□□□ 1.86
TRIM50Q86XT4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
TRIM50Q86XT4 AC131212.1-201ENST00000613771 668 ntBASIC26.67■■□□□ 1.86
TRIM50Q86XT4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 AC120024.1-201ENST00000562672 995 ntBASIC26.66■■□□□ 1.86
TRIM50Q86XT4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.66■■□□□ 1.86
TRIM50Q86XT4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM50Q86XT4 KRT18P24-201ENST00000344739 1156 ntBASIC26.65■■□□□ 1.86
TRIM50Q86XT4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM50Q86XT4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
TRIM50Q86XT4 AL356441.2-201ENST00000443009 864 ntBASIC26.65■■□□□ 1.86
TRIM50Q86XT4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.65■■□□□ 1.86
TRIM50Q86XT4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM50Q86XT4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 2715.8 ms