Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC25Q86WR0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC25Q86WR0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 HLA-V-202ENST00000446817 847 ntBASIC24.46■■□□□ 1.51
CCDC25Q86WR0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC25Q86WR0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC25Q86WR0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.44■■□□□ 1.5
CCDC25Q86WR0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 DUX4L11-201ENST00000611504 1267 ntBASIC24.44■■□□□ 1.5
CCDC25Q86WR0 DUX4L12-201ENST00000614593 1267 ntBASIC24.44■■□□□ 1.5
CCDC25Q86WR0 DUX4L14-201ENST00000621227 1267 ntBASIC24.44■■□□□ 1.5
CCDC25Q86WR0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC25Q86WR0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC25Q86WR0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.43■■□□□ 1.5
CCDC25Q86WR0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CCDC25Q86WR0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC25Q86WR0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 AP003733.4-201ENST00000623785 1697 ntBASIC24.42■■□□□ 1.5
CCDC25Q86WR0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC25Q86WR0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 AC097639.1-201ENST00000565519 1891 ntBASIC24.41■■□□□ 1.5
CCDC25Q86WR0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC25Q86WR0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 SLC6A10P-202ENST00000431994 2058 ntBASIC24.4■■□□□ 1.5
CCDC25Q86WR0 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC25Q86WR0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC25Q86WR0 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC25Q86WR0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCDC25Q86WR0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC25Q86WR0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CCDC25Q86WR0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.37■■□□□ 1.49
CCDC25Q86WR0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC25Q86WR0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC25Q86WR0 RPS2P35-201ENST00000443417 897 ntBASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms