Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PACS2Q86VP3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PACS2Q86VP3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PACS2Q86VP3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.81■■□□□ 1.4
PACS2Q86VP3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.81■■□□□ 1.4
PACS2Q86VP3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.81■■□□□ 1.4
PACS2Q86VP3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.81■■□□□ 1.4
PACS2Q86VP3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PACS2Q86VP3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PACS2Q86VP3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.8■■□□□ 1.4
PACS2Q86VP3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PACS2Q86VP3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PACS2Q86VP3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.8■■□□□ 1.4
PACS2Q86VP3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PACS2Q86VP3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PACS2Q86VP3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
PACS2Q86VP3 AL117328.2-201ENST00000624617 1940 ntBASIC23.8■■□□□ 1.4
PACS2Q86VP3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PACS2Q86VP3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PACS2Q86VP3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.79■■□□□ 1.4
PACS2Q86VP3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PACS2Q86VP3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.78■■□□□ 1.4
PACS2Q86VP3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PACS2Q86VP3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.78■■□□□ 1.4
PACS2Q86VP3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PACS2Q86VP3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PACS2Q86VP3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.78■■□□□ 1.4
PACS2Q86VP3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PACS2Q86VP3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.77■■□□□ 1.4
PACS2Q86VP3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PACS2Q86VP3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PACS2Q86VP3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.77■■□□□ 1.4
PACS2Q86VP3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PACS2Q86VP3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PACS2Q86VP3 C1orf229-201ENST00000623686 2258 ntBASIC23.76■■□□□ 1.39
PACS2Q86VP3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PACS2Q86VP3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PACS2Q86VP3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PACS2Q86VP3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.76■■□□□ 1.39
PACS2Q86VP3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.76■■□□□ 1.39
PACS2Q86VP3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PACS2Q86VP3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PACS2Q86VP3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.75■■□□□ 1.39
PACS2Q86VP3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PACS2Q86VP3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.74■■□□□ 1.39
PACS2Q86VP3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PACS2Q86VP3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PACS2Q86VP3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PACS2Q86VP3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PACS2Q86VP3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PACS2Q86VP3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.73■■□□□ 1.39
PACS2Q86VP3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.73■■□□□ 1.39
PACS2Q86VP3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PACS2Q86VP3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PACS2Q86VP3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.73■■□□□ 1.39
PACS2Q86VP3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PACS2Q86VP3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.72■■□□□ 1.39
PACS2Q86VP3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.72■■□□□ 1.39
PACS2Q86VP3 AC127502.1-201ENST00000399971 1502 ntBASIC23.72■■□□□ 1.39
PACS2Q86VP3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PACS2Q86VP3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PACS2Q86VP3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PACS2Q86VP3 EP400NL-214ENST00000641289 2402 ntBASIC23.71■■□□□ 1.39
PACS2Q86VP3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.71■■□□□ 1.39
PACS2Q86VP3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PACS2Q86VP3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PACS2Q86VP3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PACS2Q86VP3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PACS2Q86VP3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.71■■□□□ 1.39
PACS2Q86VP3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.71■■□□□ 1.39
PACS2Q86VP3 LINC01971-201ENST00000617888 1048 ntBASIC23.71■■□□□ 1.39
PACS2Q86VP3 LINC01124-201ENST00000409786 2117 ntBASIC23.71■■□□□ 1.39
PACS2Q86VP3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PACS2Q86VP3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.7■■□□□ 1.39
PACS2Q86VP3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PACS2Q86VP3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
PACS2Q86VP3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PACS2Q86VP3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PACS2Q86VP3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.69■■□□□ 1.38
PACS2Q86VP3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PACS2Q86VP3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PACS2Q86VP3 AC100797.4-201ENST00000631653 1827 ntBASIC23.69■■□□□ 1.38
PACS2Q86VP3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PACS2Q86VP3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.69■■□□□ 1.38
PACS2Q86VP3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms