Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF546Q86UE3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF546Q86UE3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF546Q86UE3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 CAHM-201ENST00000604200 896 ntBASIC19.7■□□□□ 0.74
ZNF546Q86UE3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF546Q86UE3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF546Q86UE3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF546Q86UE3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNF546Q86UE3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF546Q86UE3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF546Q86UE3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF546Q86UE3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF546Q86UE3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF546Q86UE3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF546Q86UE3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF546Q86UE3 AC141586.4-201ENST00000624558 1573 ntBASIC19.66■□□□□ 0.74
ZNF546Q86UE3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 AL117328.2-201ENST00000624617 1940 ntBASIC19.65■□□□□ 0.74
ZNF546Q86UE3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 C9orf163-202ENST00000624034 2573 ntBASIC19.65■□□□□ 0.74
ZNF546Q86UE3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF546Q86UE3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF546Q86UE3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF546Q86UE3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms