Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01554Q52M75 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC01554Q52M75 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
LINC01554Q52M75 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC01554Q52M75 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC01554Q52M75 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC01554Q52M75 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC11.92□□□□□ -0.5
LINC01554Q52M75 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC01554Q52M75 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 AC092667.1-201ENST00000434301 2586 ntBASIC11.91□□□□□ -0.5
LINC01554Q52M75 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 AC020928.2-201ENST00000588717 2197 ntBASIC11.91□□□□□ -0.5
LINC01554Q52M75 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC01554Q52M75 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC01554Q52M75 EFS-203ENST00000429593 2610 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01554Q52M75 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01554Q52M75 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01554Q52M75 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC01554Q52M75 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
LINC01554Q52M75 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 AL135925.1-201ENST00000605920 1701 ntBASIC11.89□□□□□ -0.51
LINC01554Q52M75 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 EML3-217ENST00000531557 2509 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01554Q52M75 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01554Q52M75 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LINC01554Q52M75 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LINC01554Q52M75 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01554Q52M75 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01554Q52M75 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01554Q52M75 AL031258.1-201ENST00000623562 325 ntBASIC11.87□□□□□ -0.51
LINC01554Q52M75 CASK-201ENST00000378154 2494 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01554Q52M75 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01554Q52M75 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01554Q52M75 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
LINC01554Q52M75 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01554Q52M75 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01554Q52M75 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01554Q52M75 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01554Q52M75 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01554Q52M75 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01554Q52M75 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms