Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TMEM249Q2WGJ8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM249Q2WGJ8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TMEM249Q2WGJ8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.14■□□□□ 0.81
TMEM249Q2WGJ8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TMEM249Q2WGJ8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 KRT125P-201ENST00000546827 989 ntBASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.12■□□□□ 0.81
TMEM249Q2WGJ8 AC008406.3-201ENST00000620001 1374 ntBASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TMEM249Q2WGJ8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TMEM249Q2WGJ8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 BX664725.1-201ENST00000438252 379 ntBASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM249Q2WGJ8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 KRT18P10-201ENST00000388836 1287 ntBASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 AC022616.5-201ENST00000518796 181 ntBASIC20.08■□□□□ 0.81
TMEM249Q2WGJ8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 MIR4787-201ENST00000607364 84 ntBASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM249Q2WGJ8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 LINC01003-201ENST00000564834 1764 ntBASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 AL449106.1-201ENST00000608517 1980 ntBASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM249Q2WGJ8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM249Q2WGJ8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms