Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.46■□□□□ 0.23
CKS1BP61024 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS1BP61024 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CKS1BP61024 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS1BP61024 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.46■□□□□ 0.23
CKS1BP61024 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.46■□□□□ 0.23
CKS1BP61024 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CKS1BP61024 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.46■□□□□ 0.23
CKS1BP61024 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
CKS1BP61024 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CKS1BP61024 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CKS1BP61024 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.45■□□□□ 0.22
CKS1BP61024 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CKS1BP61024 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS1BP61024 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS1BP61024 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CKS1BP61024 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CKS1BP61024 DUSP8P4-201ENST00000399538 1761 ntBASIC16.44■□□□□ 0.22
CKS1BP61024 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.44■□□□□ 0.22
CKS1BP61024 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS1BP61024 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKS1BP61024 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS1BP61024 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS1BP61024 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKS1BP61024 DUX4L28-201ENST00000623687 678 ntBASIC16.43■□□□□ 0.22
CKS1BP61024 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKS1BP61024 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS1BP61024 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKS1BP61024 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CKS1BP61024 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16.42■□□□□ 0.22
CKS1BP61024 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CKS1BP61024 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CKS1BP61024 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS1BP61024 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS1BP61024 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.41■□□□□ 0.22
CKS1BP61024 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CKS1BP61024 AC110285.7-201ENST00000624417 1536 ntBASIC16.41■□□□□ 0.22
CKS1BP61024 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.41■□□□□ 0.22
CKS1BP61024 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.41■□□□□ 0.22
CKS1BP61024 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.41■□□□□ 0.22
CKS1BP61024 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS1BP61024 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS1BP61024 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS1BP61024 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CKS1BP61024 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CKS1BP61024 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CKS1BP61024 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 AC142472.1-201ENST00000612013 1741 ntBASIC16.4■□□□□ 0.22
CKS1BP61024 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CKS1BP61024 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CKS1BP61024 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CKS1BP61024 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS1BP61024 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.39■□□□□ 0.21
CKS1BP61024 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS1BP61024 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 AC068473.5-201ENST00000616428 2072 ntBASIC16.38■□□□□ 0.21
CKS1BP61024 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKS1BP61024 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS1BP61024 WHAMMP3-201ENST00000611636 1609 ntBASIC16.37■□□□□ 0.21
CKS1BP61024 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.37■□□□□ 0.21
CKS1BP61024 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS1BP61024 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS1BP61024 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CKS1BP61024 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKS1BP61024 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 600.6 ms