Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SLC6A12P48065 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 RARRES2P2-201ENST00000394842 485 ntBASIC23.16■■□□□ 1.3
SLC6A12P48065 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.16■■□□□ 1.3
SLC6A12P48065 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A12P48065 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC6A12P48065 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SLC6A12P48065 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC6A12P48065 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A12P48065 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A12P48065 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A12P48065 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A12P48065 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A12P48065 AC133552.2-201ENST00000619106 1032 ntBASIC23.14■■□□□ 1.29
SLC6A12P48065 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SLC6A12P48065 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A12P48065 AC022211.4-201ENST00000625094 2161 ntBASIC23.13■■□□□ 1.29
SLC6A12P48065 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A12P48065 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SLC6A12P48065 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A12P48065 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A12P48065 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A12P48065 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC6A12P48065 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A12P48065 AC142381.3-201ENST00000568208 1670 ntBASIC23.13■■□□□ 1.29
SLC6A12P48065 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A12P48065 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A12P48065 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC6A12P48065 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A12P48065 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC6A12P48065 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A12P48065 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A12P48065 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A12P48065 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC6A12P48065 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC6A12P48065 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A12P48065 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A12P48065 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A12P48065 SLC6A10P-202ENST00000431994 2058 ntBASIC23.1■■□□□ 1.29
SLC6A12P48065 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A12P48065 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A12P48065 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SLC6A12P48065 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A12P48065 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A12P48065 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
SLC6A12P48065 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC6A12P48065 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A12P48065 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A12P48065 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC6A12P48065 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A12P48065 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC6A12P48065 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC6A12P48065 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
SLC6A12P48065 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC6A12P48065 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A12P48065 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A12P48065 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SLC6A12P48065 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A12P48065 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A12P48065 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC6A12P48065 AC138932.3-201ENST00000567634 1902 ntBASIC23.06■■□□□ 1.28
SLC6A12P48065 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
SLC6A12P48065 AL592293.1-201ENST00000502889 1188 ntBASIC23.06■■□□□ 1.28
SLC6A12P48065 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A12P48065 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A12P48065 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A12P48065 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC6A12P48065 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC6A12P48065 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SLC6A12P48065 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A12P48065 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.04■■□□□ 1.28
SLC6A12P48065 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SLC6A12P48065 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SLC6A12P48065 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A12P48065 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A12P48065 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A12P48065 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SLC6A12P48065 KRT18P10-201ENST00000388836 1287 ntBASIC23.03■■□□□ 1.28
SLC6A12P48065 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SLC6A12P48065 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SLC6A12P48065 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A12P48065 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SLC6A12P48065 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.02■■□□□ 1.28
SLC6A12P48065 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms