Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27■■□□□ 1.91
CLCN1P35523 AC110285.7-201ENST00000624417 1536 ntBASIC27■■□□□ 1.91
CLCN1P35523 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CLCN1P35523 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
CLCN1P35523 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CLCN1P35523 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27■■□□□ 1.91
CLCN1P35523 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27■■□□□ 1.91
CLCN1P35523 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27■■□□□ 1.91
CLCN1P35523 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27■■□□□ 1.91
CLCN1P35523 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CLCN1P35523 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27■■□□□ 1.91
CLCN1P35523 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CLCN1P35523 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CLCN1P35523 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CLCN1P35523 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CLCN1P35523 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CLCN1P35523 WHAMMP3-201ENST00000611636 1609 ntBASIC26.99■■□□□ 1.91
CLCN1P35523 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.99■■□□□ 1.91
CLCN1P35523 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CLCN1P35523 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CLCN1P35523 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
CLCN1P35523 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CLCN1P35523 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.98■■□□□ 1.91
CLCN1P35523 AP004609.3-201ENST00000610705 1884 ntBASIC26.98■■□□□ 1.91
CLCN1P35523 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CLCN1P35523 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
CLCN1P35523 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLCN1P35523 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLCN1P35523 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CLCN1P35523 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CLCN1P35523 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.96■■□□□ 1.91
CLCN1P35523 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
CLCN1P35523 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
CLCN1P35523 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.95■■□□□ 1.9
CLCN1P35523 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CLCN1P35523 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLCN1P35523 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLCN1P35523 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CLCN1P35523 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CLCN1P35523 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.94■■□□□ 1.9
CLCN1P35523 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CLCN1P35523 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CLCN1P35523 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.94■■□□□ 1.9
CLCN1P35523 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CLCN1P35523 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CLCN1P35523 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.93■■□□□ 1.9
CLCN1P35523 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLCN1P35523 LINC01124-201ENST00000409786 2117 ntBASIC26.92■■□□□ 1.9
CLCN1P35523 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLCN1P35523 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.92■■□□□ 1.9
CLCN1P35523 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.92■■□□□ 1.9
CLCN1P35523 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.92■■□□□ 1.9
CLCN1P35523 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.92■■□□□ 1.9
CLCN1P35523 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.92■■□□□ 1.9
CLCN1P35523 LINC01971-201ENST00000617888 1048 ntBASIC26.92■■□□□ 1.9
CLCN1P35523 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLCN1P35523 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLCN1P35523 AL117328.2-201ENST00000624617 1940 ntBASIC26.92■■□□□ 1.9
CLCN1P35523 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.92■■□□□ 1.9
CLCN1P35523 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLCN1P35523 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLCN1P35523 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.91■■□□□ 1.9
CLCN1P35523 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CLCN1P35523 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLCN1P35523 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLCN1P35523 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CLCN1P35523 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLCN1P35523 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLCN1P35523 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLCN1P35523 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLCN1P35523 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.9■■□□□ 1.9
CLCN1P35523 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.89■■□□□ 1.9
CLCN1P35523 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CLCN1P35523 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CLCN1P35523 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.89■■□□□ 1.9
CLCN1P35523 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.89■■□□□ 1.9
CLCN1P35523 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.89■■□□□ 1.9
CLCN1P35523 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.89■■□□□ 1.89
CLCN1P35523 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.88■■□□□ 1.89
CLCN1P35523 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CLCN1P35523 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CLCN1P35523 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLCN1P35523 ZNRF2P2-203ENST00000454624 420 ntBASIC26.88■■□□□ 1.89
CLCN1P35523 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLCN1P35523 LINC00565-201ENST00000562710 2331 ntBASIC26.88■■□□□ 1.89
CLCN1P35523 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLCN1P35523 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLCN1P35523 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLCN1P35523 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLCN1P35523 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLCN1P35523 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.86■■□□□ 1.89
CLCN1P35523 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLCN1P35523 AC010501.1-201ENST00000606270 1962 ntBASIC26.86■■□□□ 1.89
CLCN1P35523 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.86■■□□□ 1.89
CLCN1P35523 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.85■■□□□ 1.89
CLCN1P35523 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLCN1P35523 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLCN1P35523 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLCN1P35523 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLCN1P35523 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms