Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS2P33552 AP003733.4-201ENST00000623785 1697 ntBASIC17.48■□□□□ 0.39
CKS2P33552 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS2P33552 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS2P33552 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS2P33552 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS2P33552 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.47■□□□□ 0.39
CKS2P33552 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.47■□□□□ 0.39
CKS2P33552 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.47■□□□□ 0.39
CKS2P33552 AC097639.1-201ENST00000565519 1891 ntBASIC17.47■□□□□ 0.39
CKS2P33552 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CKS2P33552 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS2P33552 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.47■□□□□ 0.39
CKS2P33552 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CKS2P33552 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKS2P33552 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKS2P33552 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKS2P33552 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CKS2P33552 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.46■□□□□ 0.39
CKS2P33552 AC079834.2-201ENST00000609776 1949 ntBASIC17.46■□□□□ 0.39
CKS2P33552 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CKS2P33552 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.45■□□□□ 0.38
CKS2P33552 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.45■□□□□ 0.38
CKS2P33552 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CKS2P33552 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.45■□□□□ 0.38
CKS2P33552 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.45■□□□□ 0.38
CKS2P33552 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 AC110285.7-201ENST00000624417 1536 ntBASIC17.45■□□□□ 0.38
CKS2P33552 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.45■□□□□ 0.38
CKS2P33552 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS2P33552 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS2P33552 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CKS2P33552 AC096887.2-201ENST00000623443 1957 ntBASIC17.44■□□□□ 0.38
CKS2P33552 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS2P33552 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CKS2P33552 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.44■□□□□ 0.38
CKS2P33552 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS2P33552 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CKS2P33552 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS2P33552 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CKS2P33552 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.43■□□□□ 0.38
CKS2P33552 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.43■□□□□ 0.38
CKS2P33552 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.43■□□□□ 0.38
CKS2P33552 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.43■□□□□ 0.38
CKS2P33552 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CKS2P33552 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.42■□□□□ 0.38
CKS2P33552 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CKS2P33552 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.42■□□□□ 0.38
CKS2P33552 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CKS2P33552 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.41■□□□□ 0.38
CKS2P33552 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CKS2P33552 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
CKS2P33552 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 LINC00543-201ENST00000567234 1845 ntBASIC17.41■□□□□ 0.38
CKS2P33552 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKS2P33552 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.41■□□□□ 0.38
CKS2P33552 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CKS2P33552 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CKS2P33552 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CKS2P33552 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.4■□□□□ 0.38
CKS2P33552 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.4■□□□□ 0.38
CKS2P33552 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CKS2P33552 MIR6090-201ENST00000622481 60 ntBASIC17.4■□□□□ 0.38
CKS2P33552 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.4■□□□□ 0.38
CKS2P33552 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.4■□□□□ 0.38
CKS2P33552 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKS2P33552 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CKS2P33552 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CKS2P33552 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.39■□□□□ 0.37
CKS2P33552 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms