Protein–RNA interactions for Protein: P28335

HTR2C, 5-hydroxytryptamine receptor 2C, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR2CP28335 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR2CP28335 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.56■□□□□ 0.88
HTR2CP28335 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR2CP28335 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.56■□□□□ 0.88
HTR2CP28335 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR2CP28335 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR2CP28335 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR2CP28335 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.55■□□□□ 0.88
HTR2CP28335 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
HTR2CP28335 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR2CP28335 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.55■□□□□ 0.88
HTR2CP28335 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.55■□□□□ 0.88
HTR2CP28335 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HTR2CP28335 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.55■□□□□ 0.88
HTR2CP28335 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR2CP28335 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.55■□□□□ 0.88
HTR2CP28335 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR2CP28335 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HTR2CP28335 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR2CP28335 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.54■□□□□ 0.88
HTR2CP28335 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HTR2CP28335 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HTR2CP28335 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 SLC6A10P-202ENST00000431994 2058 ntBASIC20.53■□□□□ 0.88
HTR2CP28335 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR2CP28335 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR2CP28335 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 HLA-V-202ENST00000446817 847 ntBASIC20.52■□□□□ 0.88
HTR2CP28335 DUX4L11-201ENST00000611504 1267 ntBASIC20.52■□□□□ 0.88
HTR2CP28335 DUX4L12-201ENST00000614593 1267 ntBASIC20.52■□□□□ 0.88
HTR2CP28335 DUX4L14-201ENST00000621227 1267 ntBASIC20.52■□□□□ 0.88
HTR2CP28335 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HTR2CP28335 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HTR2CP28335 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
HTR2CP28335 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR2CP28335 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR2CP28335 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.51■□□□□ 0.87
HTR2CP28335 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HTR2CP28335 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR2CP28335 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HTR2CP28335 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR2CP28335 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HTR2CP28335 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HTR2CP28335 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HTR2CP28335 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR2CP28335 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HTR2CP28335 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR2CP28335 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.49■□□□□ 0.87
HTR2CP28335 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR2CP28335 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HTR2CP28335 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HTR2CP28335 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR2CP28335 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HTR2CP28335 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.48■□□□□ 0.87
HTR2CP28335 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR2CP28335 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR2CP28335 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR2CP28335 LINC00543-201ENST00000567234 1845 ntBASIC20.48■□□□□ 0.87
HTR2CP28335 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HTR2CP28335 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
HTR2CP28335 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR2CP28335 RPS2P35-201ENST00000443417 897 ntBASIC20.47■□□□□ 0.87
HTR2CP28335 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HTR2CP28335 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HTR2CP28335 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR2CP28335 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HTR2CP28335 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR2CP28335 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR2CP28335 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HTR2CP28335 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HTR2CP28335 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
HTR2CP28335 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
HTR2CP28335 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR2CP28335 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.46■□□□□ 0.87
HTR2CP28335 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HTR2CP28335 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR2CP28335 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HTR2CP28335 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR2CP28335 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.46■□□□□ 0.87
HTR2CP28335 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HTR2CP28335 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HTR2CP28335 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 AC126177.7-201ENST00000547904 679 ntBASIC20.45■□□□□ 0.86
HTR2CP28335 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HTR2CP28335 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HTR2CP28335 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms