Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
ATP1A3P13637 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
ATP1A3P13637 AC097639.1-201ENST00000565519 1891 ntBASIC26.38■■□□□ 1.81
ATP1A3P13637 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ATP1A3P13637 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
ATP1A3P13637 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATP1A3P13637 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATP1A3P13637 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ATP1A3P13637 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
ATP1A3P13637 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATP1A3P13637 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP1A3P13637 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP1A3P13637 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.37■■□□□ 1.81
ATP1A3P13637 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ATP1A3P13637 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.37■■□□□ 1.81
ATP1A3P13637 CR559946.2-201ENST00000623684 991 ntBASIC26.37■■□□□ 1.81
ATP1A3P13637 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.37■■□□□ 1.81
ATP1A3P13637 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP1A3P13637 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ATP1A3P13637 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP1A3P13637 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ATP1A3P13637 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP1A3P13637 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.36■■□□□ 1.81
ATP1A3P13637 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ATP1A3P13637 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ATP1A3P13637 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATP1A3P13637 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP1A3P13637 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
ATP1A3P13637 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.35■■□□□ 1.81
ATP1A3P13637 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
ATP1A3P13637 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
ATP1A3P13637 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATP1A3P13637 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.34■■□□□ 1.81
ATP1A3P13637 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.34■■□□□ 1.81
ATP1A3P13637 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ATP1A3P13637 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATP1A3P13637 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP1A3P13637 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.33■■□□□ 1.81
ATP1A3P13637 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.33■■□□□ 1.81
ATP1A3P13637 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.33■■□□□ 1.81
ATP1A3P13637 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP1A3P13637 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP1A3P13637 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP1A3P13637 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP1A3P13637 AP003733.4-201ENST00000623785 1697 ntBASIC26.32■■□□□ 1.8
ATP1A3P13637 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.32■■□□□ 1.8
ATP1A3P13637 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP1A3P13637 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.32■■□□□ 1.8
ATP1A3P13637 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP1A3P13637 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP1A3P13637 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP1A3P13637 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP1A3P13637 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.31■■□□□ 1.8
ATP1A3P13637 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
ATP1A3P13637 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP1A3P13637 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ATP1A3P13637 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.3■■□□□ 1.8
ATP1A3P13637 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP1A3P13637 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP1A3P13637 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ATP1A3P13637 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ATP1A3P13637 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP1A3P13637 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ATP1A3P13637 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
ATP1A3P13637 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
ATP1A3P13637 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
ATP1A3P13637 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
ATP1A3P13637 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.28■■□□□ 1.8
ATP1A3P13637 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP1A3P13637 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.28■■□□□ 1.8
ATP1A3P13637 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.28■■□□□ 1.8
ATP1A3P13637 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ATP1A3P13637 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.28■■□□□ 1.8
ATP1A3P13637 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.27■■□□□ 1.8
ATP1A3P13637 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP1A3P13637 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.27■■□□□ 1.8
ATP1A3P13637 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
ATP1A3P13637 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.27■■□□□ 1.8
ATP1A3P13637 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP1A3P13637 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP1A3P13637 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP1A3P13637 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.26■■□□□ 1.79
ATP1A3P13637 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP1A3P13637 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
ATP1A3P13637 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ATP1A3P13637 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP1A3P13637 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP1A3P13637 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.24■■□□□ 1.79
ATP1A3P13637 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP1A3P13637 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ATP1A3P13637 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP1A3P13637 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP1A3P13637 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP1A3P13637 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP1A3P13637 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms