Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
UBCP0CG48 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
UBCP0CG48 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UBCP0CG48 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.84■□□□□ 0.93
UBCP0CG48 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
UBCP0CG48 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.84■□□□□ 0.93
UBCP0CG48 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBCP0CG48 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.83■□□□□ 0.93
UBCP0CG48 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBCP0CG48 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBCP0CG48 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBCP0CG48 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
UBCP0CG48 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBCP0CG48 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.82■□□□□ 0.92
UBCP0CG48 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBCP0CG48 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBCP0CG48 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBCP0CG48 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UBCP0CG48 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBCP0CG48 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
UBCP0CG48 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBCP0CG48 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBCP0CG48 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBCP0CG48 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.81■□□□□ 0.92
UBCP0CG48 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
UBCP0CG48 AP003733.4-201ENST00000623785 1697 ntBASIC20.8■□□□□ 0.92
UBCP0CG48 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.8■□□□□ 0.92
UBCP0CG48 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBCP0CG48 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBCP0CG48 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBCP0CG48 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
UBCP0CG48 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
UBCP0CG48 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBCP0CG48 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBCP0CG48 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.79■□□□□ 0.92
UBCP0CG48 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBCP0CG48 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
UBCP0CG48 AC016575.1-201ENST00000607026 382 ntBASIC20.79■□□□□ 0.92
UBCP0CG48 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBCP0CG48 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBCP0CG48 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.78■□□□□ 0.92
UBCP0CG48 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.78■□□□□ 0.92
UBCP0CG48 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
UBCP0CG48 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.78■□□□□ 0.92
UBCP0CG48 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBCP0CG48 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBCP0CG48 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBCP0CG48 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBCP0CG48 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBCP0CG48 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.77■□□□□ 0.92
UBCP0CG48 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UBCP0CG48 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.77■□□□□ 0.91
UBCP0CG48 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBCP0CG48 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBCP0CG48 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
UBCP0CG48 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBCP0CG48 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
UBCP0CG48 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
UBCP0CG48 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.76■□□□□ 0.91
UBCP0CG48 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UBCP0CG48 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
UBCP0CG48 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBCP0CG48 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBCP0CG48 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.75■□□□□ 0.91
UBCP0CG48 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBCP0CG48 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
UBCP0CG48 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.75■□□□□ 0.91
UBCP0CG48 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.75■□□□□ 0.91
UBCP0CG48 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBCP0CG48 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 AL157400.5-201ENST00000507624 621 ntBASIC20.74■□□□□ 0.91
UBCP0CG48 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.74■□□□□ 0.91
UBCP0CG48 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.74■□□□□ 0.91
UBCP0CG48 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBCP0CG48 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UBCP0CG48 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms