Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC110285.7-201ENST00000624417 1536 ntBASIC20.48■□□□□ 0.87
CSF1P09603 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.48■□□□□ 0.87
CSF1P09603 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSF1P09603 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSF1P09603 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.48■□□□□ 0.87
CSF1P09603 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.48■□□□□ 0.87
CSF1P09603 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.48■□□□□ 0.87
CSF1P09603 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.48■□□□□ 0.87
CSF1P09603 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSF1P09603 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.48■□□□□ 0.87
CSF1P09603 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CSF1P09603 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CSF1P09603 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.47■□□□□ 0.87
CSF1P09603 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CSF1P09603 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CSF1P09603 AP003733.4-201ENST00000623785 1697 ntBASIC20.47■□□□□ 0.87
CSF1P09603 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSF1P09603 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CSF1P09603 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.46■□□□□ 0.87
CSF1P09603 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.46■□□□□ 0.87
CSF1P09603 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 AC096887.2-201ENST00000623443 1957 ntBASIC20.46■□□□□ 0.87
CSF1P09603 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSF1P09603 AC068473.5-201ENST00000616428 2072 ntBASIC20.46■□□□□ 0.87
CSF1P09603 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.45■□□□□ 0.86
CSF1P09603 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSF1P09603 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSF1P09603 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.45■□□□□ 0.86
CSF1P09603 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.45■□□□□ 0.86
CSF1P09603 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CSF1P09603 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.45■□□□□ 0.86
CSF1P09603 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSF1P09603 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CSF1P09603 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSF1P09603 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSF1P09603 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSF1P09603 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CSF1P09603 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSF1P09603 AC097639.1-201ENST00000565519 1891 ntBASIC20.44■□□□□ 0.86
CSF1P09603 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSF1P09603 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.44■□□□□ 0.86
CSF1P09603 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CSF1P09603 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CSF1P09603 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CSF1P09603 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSF1P09603 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSF1P09603 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSF1P09603 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CSF1P09603 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSF1P09603 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.43■□□□□ 0.86
CSF1P09603 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSF1P09603 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.43■□□□□ 0.86
CSF1P09603 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSF1P09603 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSF1P09603 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L13-201ENST00000554103 1267 ntBASIC20.42■□□□□ 0.86
CSF1P09603 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L15-201ENST00000611059 1267 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L23-201ENST00000615195 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L24-201ENST00000617576 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L22-201ENST00000618238 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L20-201ENST00000619712 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L21-201ENST00000622058 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L10-201ENST00000622460 1267 ntBASIC20.42■□□□□ 0.86
CSF1P09603 DUX4L25-201ENST00000624915 1269 ntBASIC20.42■□□□□ 0.86
CSF1P09603 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.41■□□□□ 0.86
CSF1P09603 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSF1P09603 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CSF1P09603 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSF1P09603 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.4■□□□□ 0.86
CSF1P09603 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CSF1P09603 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.4■□□□□ 0.86
CSF1P09603 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CSF1P09603 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CSF1P09603 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CSF1P09603 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSF1P09603 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.39■□□□□ 0.85
CSF1P09603 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSF1P09603 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSF1P09603 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.39■□□□□ 0.85
CSF1P09603 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSF1P09603 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.39■□□□□ 0.85
CSF1P09603 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms