Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.52■■□□□ 1.84
COL1A2P08123 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.52■■□□□ 1.84
COL1A2P08123 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.52■■□□□ 1.84
COL1A2P08123 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
COL1A2P08123 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
COL1A2P08123 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL1A2P08123 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
COL1A2P08123 KRT18P24-201ENST00000344739 1156 ntBASIC26.5■■□□□ 1.83
COL1A2P08123 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.5■■□□□ 1.83
COL1A2P08123 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.5■■□□□ 1.83
COL1A2P08123 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.5■■□□□ 1.83
COL1A2P08123 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.5■■□□□ 1.83
COL1A2P08123 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL1A2P08123 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL1A2P08123 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.49■■□□□ 1.83
COL1A2P08123 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL1A2P08123 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.49■■□□□ 1.83
COL1A2P08123 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
COL1A2P08123 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.49■■□□□ 1.83
COL1A2P08123 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL1A2P08123 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
COL1A2P08123 GUSBP5-201ENST00000418136 578 ntBASIC26.48■■□□□ 1.83
COL1A2P08123 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.48■■□□□ 1.83
COL1A2P08123 Z92544.1-202ENST00000571933 1220 ntBASIC26.48■■□□□ 1.83
COL1A2P08123 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
COL1A2P08123 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL1A2P08123 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL1A2P08123 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL1A2P08123 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
COL1A2P08123 AL592295.1-201ENST00000400984 884 ntBASIC26.47■■□□□ 1.83
COL1A2P08123 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.47■■□□□ 1.83
COL1A2P08123 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL1A2P08123 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL1A2P08123 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
COL1A2P08123 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL1A2P08123 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.46■■□□□ 1.83
COL1A2P08123 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.46■■□□□ 1.83
COL1A2P08123 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.46■■□□□ 1.83
COL1A2P08123 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL1A2P08123 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.46■■□□□ 1.83
COL1A2P08123 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
COL1A2P08123 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL1A2P08123 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL1A2P08123 THA1P-201ENST00000590384 1145 ntBASIC26.46■■□□□ 1.83
COL1A2P08123 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL1A2P08123 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.45■■□□□ 1.83
COL1A2P08123 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.45■■□□□ 1.82
COL1A2P08123 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A2P08123 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.44■■□□□ 1.82
COL1A2P08123 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
COL1A2P08123 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
COL1A2P08123 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.44■■□□□ 1.82
COL1A2P08123 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.43■■□□□ 1.82
COL1A2P08123 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL1A2P08123 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.43■■□□□ 1.82
COL1A2P08123 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
COL1A2P08123 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
COL1A2P08123 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A2P08123 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A2P08123 AC120024.1-201ENST00000562672 995 ntBASIC26.42■■□□□ 1.82
COL1A2P08123 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A2P08123 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A2P08123 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A2P08123 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A2P08123 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A2P08123 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
COL1A2P08123 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
COL1A2P08123 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A2P08123 AC239859.2-201ENST00000444165 318 ntBASIC26.4■■□□□ 1.82
COL1A2P08123 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.4■■□□□ 1.82
COL1A2P08123 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.4■■□□□ 1.82
COL1A2P08123 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A2P08123 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.39■■□□□ 1.82
COL1A2P08123 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL1A2P08123 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A2P08123 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL1A2P08123 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL1A2P08123 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL1A2P08123 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL1A2P08123 BX664725.1-201ENST00000438252 379 ntBASIC26.38■■□□□ 1.81
COL1A2P08123 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.38■■□□□ 1.81
COL1A2P08123 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A2P08123 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A2P08123 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.37■■□□□ 1.81
COL1A2P08123 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.37■■□□□ 1.81
COL1A2P08123 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A2P08123 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A2P08123 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.36■■□□□ 1.81
COL1A2P08123 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A2P08123 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.36■■□□□ 1.81
COL1A2P08123 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
COL1A2P08123 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A2P08123 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A2P08123 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
COL1A2P08123 AC137630.3-201ENST00000607245 391 ntBASIC26.35■■□□□ 1.81
COL1A2P08123 AC011551.1-201ENST00000614101 683 ntBASIC26.35■■□□□ 1.81
COL1A2P08123 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.35■■□□□ 1.81
COL1A2P08123 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A2P08123 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.35■■□□□ 1.81
COL1A2P08123 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms