Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ABCA1O95477 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA1O95477 KRT18P24-201ENST00000344739 1156 ntBASIC19.99■□□□□ 0.79
ABCA1O95477 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCA1O95477 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA1O95477 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.99■□□□□ 0.79
ABCA1O95477 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCA1O95477 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA1O95477 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA1O95477 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ABCA1O95477 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA1O95477 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.98■□□□□ 0.79
ABCA1O95477 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.98■□□□□ 0.79
ABCA1O95477 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.98■□□□□ 0.79
ABCA1O95477 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ABCA1O95477 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA1O95477 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.97■□□□□ 0.79
ABCA1O95477 AC137630.3-201ENST00000607245 391 ntBASIC19.97■□□□□ 0.79
ABCA1O95477 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA1O95477 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA1O95477 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ABCA1O95477 AC110285.6-201ENST00000617652 491 ntBASIC19.97■□□□□ 0.79
ABCA1O95477 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
ABCA1O95477 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ABCA1O95477 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ABCA1O95477 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ABCA1O95477 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA1O95477 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA1O95477 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA1O95477 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.96■□□□□ 0.79
ABCA1O95477 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ABCA1O95477 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.95■□□□□ 0.78
ABCA1O95477 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ABCA1O95477 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA1O95477 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.95■□□□□ 0.78
ABCA1O95477 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.95■□□□□ 0.78
ABCA1O95477 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.95■□□□□ 0.78
ABCA1O95477 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA1O95477 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA1O95477 KRT18P10-201ENST00000388836 1287 ntBASIC19.94■□□□□ 0.78
ABCA1O95477 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.94■□□□□ 0.78
ABCA1O95477 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.94■□□□□ 0.78
ABCA1O95477 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ABCA1O95477 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.93■□□□□ 0.78
ABCA1O95477 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA1O95477 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.93■□□□□ 0.78
ABCA1O95477 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ABCA1O95477 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCA1O95477 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCA1O95477 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ABCA1O95477 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.92■□□□□ 0.78
ABCA1O95477 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA1O95477 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA1O95477 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ABCA1O95477 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.92■□□□□ 0.78
ABCA1O95477 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA1O95477 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.92■□□□□ 0.78
ABCA1O95477 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.92■□□□□ 0.78
ABCA1O95477 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ABCA1O95477 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ABCA1O95477 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.91■□□□□ 0.78
ABCA1O95477 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ABCA1O95477 MIR3621-201ENST00000580529 85 ntBASIC19.91■□□□□ 0.78
ABCA1O95477 AC092028.1-203ENST00000608262 953 ntBASIC19.91■□□□□ 0.78
ABCA1O95477 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCA1O95477 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ABCA1O95477 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCA1O95477 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCA1O95477 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCA1O95477 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ABCA1O95477 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCA1O95477 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCA1O95477 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCA1O95477 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.9■□□□□ 0.78
ABCA1O95477 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.9■□□□□ 0.78
ABCA1O95477 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.89■□□□□ 0.77
ABCA1O95477 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCA1O95477 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCA1O95477 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCA1O95477 AC021242.3-201ENST00000607598 1377 ntBASIC19.89■□□□□ 0.77
ABCA1O95477 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
ABCA1O95477 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCA1O95477 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 AL139246.5-201ENST00000606645 996 ntBASIC19.88■□□□□ 0.77
ABCA1O95477 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ABCA1O95477 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCA1O95477 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.88■□□□□ 0.77
ABCA1O95477 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCA1O95477 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms