Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.2■□□□□ 0.66
CLN5O75503 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.2■□□□□ 0.66
CLN5O75503 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN5O75503 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.2■□□□□ 0.66
CLN5O75503 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLN5O75503 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
CLN5O75503 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLN5O75503 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLN5O75503 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLN5O75503 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.19■□□□□ 0.66
CLN5O75503 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.19■□□□□ 0.66
CLN5O75503 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLN5O75503 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLN5O75503 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CLN5O75503 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN5O75503 DUX4L11-201ENST00000611504 1267 ntBASIC19.18■□□□□ 0.66
CLN5O75503 DUX4L12-201ENST00000614593 1267 ntBASIC19.18■□□□□ 0.66
CLN5O75503 DUX4L14-201ENST00000621227 1267 ntBASIC19.18■□□□□ 0.66
CLN5O75503 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CLN5O75503 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN5O75503 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.17■□□□□ 0.66
CLN5O75503 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLN5O75503 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
CLN5O75503 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLN5O75503 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.17■□□□□ 0.66
CLN5O75503 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLN5O75503 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLN5O75503 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CLN5O75503 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLN5O75503 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLN5O75503 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLN5O75503 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLN5O75503 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.15■□□□□ 0.66
CLN5O75503 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
CLN5O75503 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLN5O75503 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.15■□□□□ 0.66
CLN5O75503 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLN5O75503 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLN5O75503 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
CLN5O75503 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLN5O75503 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLN5O75503 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.14■□□□□ 0.65
CLN5O75503 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.14■□□□□ 0.65
CLN5O75503 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLN5O75503 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLN5O75503 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CLN5O75503 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLN5O75503 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.14■□□□□ 0.65
CLN5O75503 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLN5O75503 AC148477.6-201ENST00000623746 465 ntBASIC19.13■□□□□ 0.65
CLN5O75503 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLN5O75503 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLN5O75503 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.13■□□□□ 0.65
CLN5O75503 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLN5O75503 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLN5O75503 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLN5O75503 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLN5O75503 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CLN5O75503 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 MIR219A2-201ENST00000608502 1504 ntBASIC19.12■□□□□ 0.65
CLN5O75503 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLN5O75503 ZNRF2P2-203ENST00000454624 420 ntBASIC19.12■□□□□ 0.65
CLN5O75503 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms