Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
SIPA1L3O60292 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SIPA1L3O60292 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SIPA1L3O60292 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SIPA1L3O60292 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.14■■■□□ 2.58
SIPA1L3O60292 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.14■■■□□ 2.58
SIPA1L3O60292 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.14■■■□□ 2.58
SIPA1L3O60292 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SIPA1L3O60292 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SIPA1L3O60292 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SIPA1L3O60292 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.13■■■□□ 2.57
SIPA1L3O60292 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SIPA1L3O60292 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SIPA1L3O60292 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
SIPA1L3O60292 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SIPA1L3O60292 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
SIPA1L3O60292 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.11■■■□□ 2.57
SIPA1L3O60292 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SIPA1L3O60292 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SIPA1L3O60292 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SIPA1L3O60292 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SIPA1L3O60292 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.1■■■□□ 2.57
SIPA1L3O60292 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
SIPA1L3O60292 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SIPA1L3O60292 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SIPA1L3O60292 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.1■■■□□ 2.57
SIPA1L3O60292 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SIPA1L3O60292 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SIPA1L3O60292 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SIPA1L3O60292 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SIPA1L3O60292 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.08■■■□□ 2.57
SIPA1L3O60292 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SIPA1L3O60292 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.08■■■□□ 2.57
SIPA1L3O60292 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.07■■■□□ 2.56
SIPA1L3O60292 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.56
SIPA1L3O60292 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.07■■■□□ 2.56
SIPA1L3O60292 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
SIPA1L3O60292 KRT18P24-201ENST00000344739 1156 ntBASIC31.07■■■□□ 2.56
SIPA1L3O60292 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.07■■■□□ 2.56
SIPA1L3O60292 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SIPA1L3O60292 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SIPA1L3O60292 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SIPA1L3O60292 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.05■■■□□ 2.56
SIPA1L3O60292 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.05■■■□□ 2.56
SIPA1L3O60292 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.05■■■□□ 2.56
SIPA1L3O60292 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
SIPA1L3O60292 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SIPA1L3O60292 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
SIPA1L3O60292 AC131212.1-201ENST00000613771 668 ntBASIC31.05■■■□□ 2.56
SIPA1L3O60292 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 BX664725.1-201ENST00000438252 379 ntBASIC31.04■■■□□ 2.56
SIPA1L3O60292 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
SIPA1L3O60292 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SIPA1L3O60292 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.03■■■□□ 2.56
SIPA1L3O60292 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.03■■■□□ 2.56
SIPA1L3O60292 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.03■■■□□ 2.56
SIPA1L3O60292 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SIPA1L3O60292 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
SIPA1L3O60292 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.02■■■□□ 2.56
SIPA1L3O60292 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.02■■■□□ 2.56
SIPA1L3O60292 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SIPA1L3O60292 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
SIPA1L3O60292 THA1P-201ENST00000590384 1145 ntBASIC31.02■■■□□ 2.56
SIPA1L3O60292 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.01■■■□□ 2.56
SIPA1L3O60292 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SIPA1L3O60292 AC239859.2-201ENST00000444165 318 ntBASIC31.01■■■□□ 2.55
SIPA1L3O60292 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.01■■■□□ 2.55
SIPA1L3O60292 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.01■■■□□ 2.55
SIPA1L3O60292 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
SIPA1L3O60292 AL356441.2-201ENST00000443009 864 ntBASIC31■■■□□ 2.55
SIPA1L3O60292 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31■■■□□ 2.55
SIPA1L3O60292 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31■■■□□ 2.55
SIPA1L3O60292 AC120024.1-201ENST00000562672 995 ntBASIC31■■■□□ 2.55
SIPA1L3O60292 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31■■■□□ 2.55
SIPA1L3O60292 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SIPA1L3O60292 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31■■■□□ 2.55
SIPA1L3O60292 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31■■■□□ 2.55
SIPA1L3O60292 UNC93B8-201ENST00000511903 705 ntBASIC31■■■□□ 2.55
SIPA1L3O60292 AC011551.1-201ENST00000614101 683 ntBASIC31■■■□□ 2.55
SIPA1L3O60292 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
SIPA1L3O60292 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.99■■■□□ 2.55
SIPA1L3O60292 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SIPA1L3O60292 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SIPA1L3O60292 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SIPA1L3O60292 AC137630.3-201ENST00000607245 391 ntBASIC30.99■■■□□ 2.55
SIPA1L3O60292 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SIPA1L3O60292 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.98■■■□□ 2.55
SIPA1L3O60292 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SIPA1L3O60292 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.98■■■□□ 2.55
SIPA1L3O60292 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
SIPA1L3O60292 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SIPA1L3O60292 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SIPA1L3O60292 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SIPA1L3O60292 AC096887.2-201ENST00000623443 1957 ntBASIC30.97■■■□□ 2.55
SIPA1L3O60292 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms