Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PHF1O43189 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHF1O43189 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
PHF1O43189 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHF1O43189 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.44■□□□□ 0.86
PHF1O43189 MIR935-201ENST00000401179 91 ntBASIC20.44■□□□□ 0.86
PHF1O43189 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHF1O43189 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
PHF1O43189 AL592293.1-201ENST00000502889 1188 ntBASIC20.44■□□□□ 0.86
PHF1O43189 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PHF1O43189 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.44■□□□□ 0.86
PHF1O43189 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHF1O43189 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHF1O43189 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHF1O43189 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHF1O43189 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
PHF1O43189 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PHF1O43189 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.43■□□□□ 0.86
PHF1O43189 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHF1O43189 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PHF1O43189 AC133552.2-201ENST00000619106 1032 ntBASIC20.42■□□□□ 0.86
PHF1O43189 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.41■□□□□ 0.86
PHF1O43189 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.41■□□□□ 0.86
PHF1O43189 THA1P-201ENST00000590384 1145 ntBASIC20.41■□□□□ 0.86
PHF1O43189 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.41■□□□□ 0.86
PHF1O43189 AC009831.1-201ENST00000580420 1582 ntBASIC20.41■□□□□ 0.86
PHF1O43189 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHF1O43189 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHF1O43189 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHF1O43189 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF1O43189 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PHF1O43189 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF1O43189 RP9P-202ENST00000450133 1212 ntBASIC20.4■□□□□ 0.86
PHF1O43189 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PHF1O43189 AC093536.1-201ENST00000569153 554 ntBASIC20.4■□□□□ 0.86
PHF1O43189 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHF1O43189 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.39■□□□□ 0.86
PHF1O43189 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
PHF1O43189 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHF1O43189 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PHF1O43189 AC009299.2-201ENST00000482477 511 ntBASIC20.39■□□□□ 0.85
PHF1O43189 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PHF1O43189 BHLHE23-202ENST00000612929 1109 ntBASIC20.39■□□□□ 0.85
PHF1O43189 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
PHF1O43189 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PHF1O43189 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 KRT8P33-201ENST00000508125 1423 ntBASIC20.38■□□□□ 0.85
PHF1O43189 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.38■□□□□ 0.85
PHF1O43189 MIR3960-201ENST00000583311 91 ntBASIC20.38■□□□□ 0.85
PHF1O43189 AC026202.3-201ENST00000600805 1127 ntBASIC20.38■□□□□ 0.85
PHF1O43189 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PHF1O43189 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PHF1O43189 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PHF1O43189 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHF1O43189 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.37■□□□□ 0.85
PHF1O43189 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHF1O43189 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHF1O43189 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
PHF1O43189 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHF1O43189 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PHF1O43189 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PHF1O43189 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.36■□□□□ 0.85
PHF1O43189 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.36■□□□□ 0.85
PHF1O43189 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.36■□□□□ 0.85
PHF1O43189 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PHF1O43189 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.36■□□□□ 0.85
PHF1O43189 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.35■□□□□ 0.85
PHF1O43189 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF1O43189 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF1O43189 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PHF1O43189 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF1O43189 AC093323.1-202ENST00000635031 2045 ntBASIC20.34■□□□□ 0.85
PHF1O43189 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.33■□□□□ 0.85
PHF1O43189 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms