Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHOXO15266 AC092803.2-201ENST00000564287 1899 ntBASIC20.16■□□□□ 0.82
SHOXO15266 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.16■□□□□ 0.82
SHOXO15266 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SHOXO15266 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.16■□□□□ 0.82
SHOXO15266 C9orf163-202ENST00000624034 2573 ntBASIC20.16■□□□□ 0.82
SHOXO15266 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SHOXO15266 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHOXO15266 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.15■□□□□ 0.82
SHOXO15266 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHOXO15266 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.15■□□□□ 0.82
SHOXO15266 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.15■□□□□ 0.82
SHOXO15266 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.15■□□□□ 0.82
SHOXO15266 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHOXO15266 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SHOXO15266 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.15■□□□□ 0.82
SHOXO15266 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHOXO15266 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.14■□□□□ 0.82
SHOXO15266 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHOXO15266 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHOXO15266 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SHOXO15266 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHOXO15266 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHOXO15266 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHOXO15266 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.14■□□□□ 0.81
SHOXO15266 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SHOXO15266 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHOXO15266 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHOXO15266 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHOXO15266 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SHOXO15266 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHOXO15266 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHOXO15266 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SHOXO15266 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SHOXO15266 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHOXO15266 LINC01971-201ENST00000617888 1048 ntBASIC20.12■□□□□ 0.81
SHOXO15266 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.12■□□□□ 0.81
SHOXO15266 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.12■□□□□ 0.81
SHOXO15266 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHOXO15266 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.12■□□□□ 0.81
SHOXO15266 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHOXO15266 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHOXO15266 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHOXO15266 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHOXO15266 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.11■□□□□ 0.81
SHOXO15266 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHOXO15266 ABCB10P4-201ENST00000566803 2184 ntBASIC20.11■□□□□ 0.81
SHOXO15266 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHOXO15266 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHOXO15266 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
SHOXO15266 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHOXO15266 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHOXO15266 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.1■□□□□ 0.81
SHOXO15266 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.1■□□□□ 0.81
SHOXO15266 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHOXO15266 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.09■□□□□ 0.81
SHOXO15266 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.09■□□□□ 0.81
SHOXO15266 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHOXO15266 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHOXO15266 AC142381.3-201ENST00000568208 1670 ntBASIC20.09■□□□□ 0.81
SHOXO15266 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.09■□□□□ 0.81
SHOXO15266 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHOXO15266 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHOXO15266 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHOXO15266 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHOXO15266 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHOXO15266 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHOXO15266 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SHOXO15266 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.08■□□□□ 0.81
SHOXO15266 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
SHOXO15266 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHOXO15266 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.08■□□□□ 0.81
SHOXO15266 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHOXO15266 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SHOXO15266 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHOXO15266 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.08■□□□□ 0.8
SHOXO15266 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SHOXO15266 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.07■□□□□ 0.8
SHOXO15266 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHOXO15266 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SHOXO15266 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHOXO15266 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.06■□□□□ 0.8
SHOXO15266 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.06■□□□□ 0.8
SHOXO15266 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms