Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
AP3D1O14617 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.16■■□□□ 1.14
AP3D1O14617 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
AP3D1O14617 AC096887.2-201ENST00000623443 1957 ntBASIC22.16■■□□□ 1.14
AP3D1O14617 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
AP3D1O14617 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
AP3D1O14617 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.16■■□□□ 1.14
AP3D1O14617 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.16■■□□□ 1.14
AP3D1O14617 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
AP3D1O14617 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
AP3D1O14617 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
AP3D1O14617 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.15■■□□□ 1.14
AP3D1O14617 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
AP3D1O14617 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
AP3D1O14617 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
AP3D1O14617 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
AP3D1O14617 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
AP3D1O14617 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AP3D1O14617 AC025884.2-201ENST00000553429 711 ntBASIC22.15■■□□□ 1.14
AP3D1O14617 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.15■■□□□ 1.14
AP3D1O14617 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.15■■□□□ 1.14
AP3D1O14617 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
AP3D1O14617 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
AP3D1O14617 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.14■■□□□ 1.14
AP3D1O14617 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
AP3D1O14617 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
AP3D1O14617 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
AP3D1O14617 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
AP3D1O14617 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
AP3D1O14617 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
AP3D1O14617 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.13■■□□□ 1.13
AP3D1O14617 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
AP3D1O14617 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
AP3D1O14617 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
AP3D1O14617 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
AP3D1O14617 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.12■■□□□ 1.13
AP3D1O14617 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
AP3D1O14617 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
AP3D1O14617 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
AP3D1O14617 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
AP3D1O14617 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.11■■□□□ 1.13
AP3D1O14617 SMPD5-203ENST00000639008 1464 ntBASIC22.11■■□□□ 1.13
AP3D1O14617 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
AP3D1O14617 GPX1-201ENST00000419349 1106 ntBASIC22.11■■□□□ 1.13
AP3D1O14617 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
AP3D1O14617 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
AP3D1O14617 AC142381.3-201ENST00000568208 1670 ntBASIC22.11■■□□□ 1.13
AP3D1O14617 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
AP3D1O14617 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
AP3D1O14617 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.1■■□□□ 1.13
AP3D1O14617 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.1■■□□□ 1.13
AP3D1O14617 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
AP3D1O14617 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
AP3D1O14617 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 ECEL1P2-201ENST00000461596 1295 ntBASIC22.09■■□□□ 1.13
AP3D1O14617 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.09■■□□□ 1.13
AP3D1O14617 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
AP3D1O14617 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.09■■□□□ 1.13
AP3D1O14617 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
AP3D1O14617 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
AP3D1O14617 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
AP3D1O14617 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
AP3D1O14617 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.08■■□□□ 1.13
AP3D1O14617 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
AP3D1O14617 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
AP3D1O14617 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
AP3D1O14617 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.08■■□□□ 1.12
AP3D1O14617 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.07■■□□□ 1.12
AP3D1O14617 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
AP3D1O14617 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 MIR3960-201ENST00000583311 91 ntBASIC22.06■■□□□ 1.12
AP3D1O14617 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
AP3D1O14617 AC022211.4-201ENST00000625094 2161 ntBASIC22.05■■□□□ 1.12
AP3D1O14617 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.05■■□□□ 1.12
AP3D1O14617 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.05■■□□□ 1.12
AP3D1O14617 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
AP3D1O14617 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
AP3D1O14617 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.05■■□□□ 1.12
AP3D1O14617 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
AP3D1O14617 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
AP3D1O14617 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
AP3D1O14617 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
AP3D1O14617 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
AP3D1O14617 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
AP3D1O14617 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
AP3D1O14617 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
AP3D1O14617 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
AP3D1O14617 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
AP3D1O14617 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.04■■□□□ 1.12
AP3D1O14617 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms