Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SOX1O00570 IKBKGP1-201ENST00000612193 1073 ntBASIC26.1■■□□□ 1.77
SOX1O00570 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SOX1O00570 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.1■■□□□ 1.77
SOX1O00570 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SOX1O00570 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.09■■□□□ 1.77
SOX1O00570 AF213884.3-201ENST00000563833 479 ntBASIC26.09■■□□□ 1.77
SOX1O00570 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SOX1O00570 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
SOX1O00570 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
SOX1O00570 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SOX1O00570 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.07■■□□□ 1.76
SOX1O00570 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.06■■□□□ 1.76
SOX1O00570 AP004833.2-201ENST00000532228 1454 ntBASIC26.06■■□□□ 1.76
SOX1O00570 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SOX1O00570 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SOX1O00570 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.06■■□□□ 1.76
SOX1O00570 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
SOX1O00570 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SOX1O00570 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.06■■□□□ 1.76
SOX1O00570 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.05■■□□□ 1.76
SOX1O00570 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.05■■□□□ 1.76
SOX1O00570 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SOX1O00570 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
SOX1O00570 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.05■■□□□ 1.76
SOX1O00570 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SOX1O00570 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SOX1O00570 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.04■■□□□ 1.76
SOX1O00570 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.04■■□□□ 1.76
SOX1O00570 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SOX1O00570 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SOX1O00570 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SOX1O00570 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SOX1O00570 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SOX1O00570 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SOX1O00570 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SOX1O00570 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SOX1O00570 ESRRAP2-201ENST00000418437 1549 ntBASIC26.03■■□□□ 1.76
SOX1O00570 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SOX1O00570 MIR939-201ENST00000401314 82 ntBASIC26.02■■□□□ 1.76
SOX1O00570 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.02■■□□□ 1.76
SOX1O00570 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SOX1O00570 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.02■■□□□ 1.76
SOX1O00570 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SOX1O00570 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.01■■□□□ 1.75
SOX1O00570 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SOX1O00570 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SOX1O00570 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SOX1O00570 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SOX1O00570 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SOX1O00570 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SOX1O00570 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.99■■□□□ 1.75
SOX1O00570 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SOX1O00570 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.99■■□□□ 1.75
SOX1O00570 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SOX1O00570 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.99■■□□□ 1.75
SOX1O00570 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SOX1O00570 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SOX1O00570 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.98■■□□□ 1.75
SOX1O00570 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SOX1O00570 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.98■■□□□ 1.75
SOX1O00570 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.98■■□□□ 1.75
SOX1O00570 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.98■■□□□ 1.75
SOX1O00570 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.98■■□□□ 1.75
SOX1O00570 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.98■■□□□ 1.75
SOX1O00570 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.98■■□□□ 1.75
SOX1O00570 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SOX1O00570 ID1-201ENST00000376105 1233 ntBASIC25.97■■□□□ 1.75
SOX1O00570 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SOX1O00570 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.97■■□□□ 1.75
SOX1O00570 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
SOX1O00570 AP001330.3-201ENST00000520123 633 ntBASIC25.96■■□□□ 1.75
SOX1O00570 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SOX1O00570 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SOX1O00570 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SOX1O00570 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SOX1O00570 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.94■■□□□ 1.74
SOX1O00570 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SOX1O00570 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SOX1O00570 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SOX1O00570 AC022517.1-201ENST00000592429 346 ntBASIC25.93■■□□□ 1.74
SOX1O00570 AL137784.2-201ENST00000607332 1000 ntBASIC25.93■■□□□ 1.74
SOX1O00570 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
SOX1O00570 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOX1O00570 KRT18P10-201ENST00000388836 1287 ntBASIC25.92■■□□□ 1.74
SOX1O00570 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.92■■□□□ 1.74
SOX1O00570 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.92■■□□□ 1.74
SOX1O00570 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SOX1O00570 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SOX1O00570 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SOX1O00570 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.91■■□□□ 1.74
SOX1O00570 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SOX1O00570 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SOX1O00570 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SOX1O00570 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.9■■□□□ 1.74
SOX1O00570 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.9■■□□□ 1.74
SOX1O00570 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.89■■□□□ 1.74
SOX1O00570 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SOX1O00570 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
SOX1O00570 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms